lpipes / tronkoLinks
A rapid phylogeny-based method for accurate community profiling of large-scale metabarcoding datasets
☆24Updated 3 months ago
Alternatives and similar repositories for tronko
Users that are interested in tronko are comparing it to the libraries listed below
Sorting:
- Detect contigs of complete circular genomes☆23Updated 6 years ago
- De novo VIral Genome Annotator☆23Updated 10 months ago
- Paint genomes with taxa-specific k-mer probabilities☆15Updated 3 years ago
- ☆19Updated last year
- Fast, scalable, accurate and accessible Bayesian phylogenetics☆39Updated last month
- Tool for exploring sequence alignment algorithms☆13Updated 11 months ago
- Scalable relaxed clock phylogenetic dating☆25Updated last week
- From genomes to phenotypes: Traitar3, the microbial trait analyzer (for Python3)☆22Updated last year
- C++ tools for NCBI taxonomy tasks☆11Updated last month
- ☆18Updated 2 weeks ago
- Simple-to-use interactive comparison of two bacterial genomes☆16Updated last month
- Neptune: Genomic Signature Discovery☆20Updated 8 months ago
- Simulate mutations in genomes☆15Updated 5 years ago
- Plot genome alignment figure using progressiveMauve & genoPlotR☆22Updated 3 years ago
- ☆20Updated last year
- Calculate genome wide average nucleotide identity (gwANI) for a multiFASTA alignment☆16Updated 6 years ago
- a re-packaging of the sankey plot function for kraken reports taken from pavian and sankeyD3 from Florian Breitwieser