Russel88 / MAGinatorLinks
MAGinator - Accurate SNV calling and profiling of MAGs
☆22Updated last month
Alternatives and similar repositories for MAGinator
Users that are interested in MAGinator are comparing it to the libraries listed below
Sorting:
- ☆13Updated 7 years ago
- KEGG Module Evaluation Tool☆30Updated last year
- PlasX, a machine learning classifier for identifying plasmid sequences based on genetic architecture☆37Updated 3 years ago
- zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)☆59Updated this week
- Downstream processing of VAMB binning for Viral Elucidation☆50Updated last year
- ☆21Updated 3 years ago
- skDER & CiDDER: efficient & high-resolution dereplication of microbial genomes.☆46Updated last week
- Classify metagenomic contigs as eukaryotic or prokaryotic☆37Updated 2 years ago
- BEAV: Bacterial Element Annotation reVamped☆66Updated 8 months ago
- A comprehensive bacterial core gene-set annotation pipeline based on Roary and pairwise ILPs☆29Updated 8 months ago
- ☆26Updated 2 years ago
- A workflow and scripts for large-scale antiSMASH analyses☆41Updated 3 months ago
- ☆16Updated 2 months ago
- Pipeline for metagenome and metatranscriptome joint assembly☆21Updated 2 years ago
- Bacterial GWAS analysis☆42Updated last week
- A toolkit for prokaryotic comparative genomics☆49Updated 5 months ago
- alignment-free coverage calculation for metagenomic binning >100 times faster☆46Updated 4 months ago
- MAG Circularization Method☆33Updated 3 years ago
- ☆52Updated 2 weeks ago
- ☆18Updated 2 years ago
- Melon: metagenomic long-read-based taxonomic identification and quantification using marker genes☆36Updated 2 months ago
- Prophage Activity Estimator☆26Updated last year
- EzAAI - High Throughput Prokaryotic AAI Calculator☆42Updated last week
- Fast and sensitive discovery of complete phages and prophages in bacterial genome sequences☆20Updated 7 months ago
- ☆45Updated 2 years ago
- Python script to upload bins and MAGs to ENA (European Nucleotide Archive)☆24Updated this week
- Core ELEment Bias Removal In Metagenome Binned ORthologs: A pipeline to make pangenomes from MAGs☆24Updated 11 months ago
- Growth Rate Index (GRiD) measures bacterial growth rate from reference genomes (including draft quality genomes) and metagenomic bins at …☆32Updated 5 years ago
- CroCoDeEL is a tool that detects cross-sample contamination in shotgun metagenomic data☆24Updated 2 weeks ago
- Gupta et al., TaxiBGC: a Taxonomy-guided Approach for Profiling Experimentally Characterized Microbial Biosynthetic Gene Clusters and Sec…☆16Updated 2 years ago