Alternatives and similar repositories for SymbNET:

Users that are interested in SymbNET are comparing it to the libraries listed below

• Gibbons-Lab / pipelines
  Pipelines used in the lab.
  ☆12Updated 5 months ago
• kelwyres / Bactabolize
  ☆38Updated 3 months ago
• Matteopaluh / KEMET
  KEGG Module Evaluation Tool
  ☆29Updated last year
• allind / EukDetect
  ☆50Updated 11 months ago
• cjneely10 / MetaSanity
  Pipeline for major biological analyses.
  ☆34Updated 2 years ago
• Kalan-Lab / lsaBGC
  lsaBGC - Lineage Specific Analysis of Biosynthetic Gene Clusters
  ☆37Updated this week
• michaelkyu / PlasX
  PlasX, a machine learning classifier for identifying plasmid sequences based on genetic architecture
  ☆33Updated 3 years ago
• valdeanda / mebs
  Protocol for finding informative protein families and then using them to score omic samples
  ☆18Updated 2 years ago
• metaGmetapop / metapop
  A pipeline for the macro- and micro-diversity analyses and visualization of metagenomic-derived populations
  ☆40Updated last year
• lauriebelch / SOCfinder
  ☆16Updated 3 months ago
• patrickwest / EukRep_Pipeline
  ☆24Updated 6 years ago
• apcamargo / ictv-mmseqs2-protein-database
  ☆29Updated last month
• zreitz / multismash
  A workflow and scripts for large-scale antiSMASH analyses
  ☆37Updated 3 months ago
• tamascogustavo / chimera
  Chimera: An easy to use pipeline for Genome based Metabolic Network reconstruction, evaluation and visualization.
  ☆17Updated 2 years ago
• mgtools / PhyloMint
  Pathway-based and phylogenetically adjusted quantification of competition and cooperation between microbial species
  ☆12Updated 4 years ago
• adamhockenberry / bacphlip
  A python library for predicting phage lifestyle based on genome sequence
  ☆36Updated last year
• RasmussenLab / phamb
  Downstream processing of VAMB binning for Viral Elucidation
  ☆48Updated 8 months ago
• endixk / ezaai
  EzAAI - High Throughput Prokaryotic AAI Calculator
  ☆38Updated 5 months ago
• AnantharamanLab / PropagAtE
  Prophage Activity Estimator
  ☆26Updated 9 months ago
• ohlab / GRiD
  Growth Rate Index (GRiD) measures bacterial growth rate from reference genomes (including draft quality genomes) and metagenomic bins at …
  ☆32Updated 4 years ago
• snayfach / MAGpurify
  Improvement of metagenome-assembled genomes
  ☆50Updated 5 years ago
• XiaofangJ / PhaseFinder
  A pipeline to computationally identify invertible DNA regions and quantify their orientations.
  ☆29Updated last year
• snayfach / UHGV
  Unified Human Gut Virome Catalog
  ☆27Updated 8 months ago
• emmamglass / reconstructor
  This repository contains all source code in the reconstructor python package, installation instructions, important file dependencies, and…
  ☆19Updated 2 weeks ago
• Kalan-Lab / zol
  zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)
  ☆58Updated last month
• yosuken / MAGRE
  ☆12Updated 3 years ago
• Russel88 / MAGinator
  MAGinator - Accurate SNV calling and profiling of MAGs
  ☆22Updated 2 months ago
• raw-lab / MetaCerberus
  Python code for versatile Functional Ontology Assignments for Metagenomes searching via Hidden Markov Model (HMM) with environmental focu…
  ☆55Updated 3 weeks ago
• feargalr / Demovir
  Taxonomic classification of viruses at Order and Family level
  ☆20Updated 2 years ago
• mgtools / MinPath
  MinPath (Minimal set of Pathways) is a parsimony approach for biological pathway reconstructions using protein family predictions, achiev…
  ☆20Updated 3 years ago