☆63Mar 14, 2024Updated last year
Alternatives and similar repositories for myscripts
Users that are interested in myscripts are comparing it to the libraries listed below
Sorting:
- Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.☆56Updated this week
- A pipeline to identify gene family using mutiple tools and scripts.☆11Aug 22, 2021Updated 4 years ago
- Genomic related tools☆75Nov 13, 2021Updated 4 years ago
- Extract longest transcript or longest CDS transcript from GTF annotation file or gencode transcripts fasta file.☆21Mar 25, 2022Updated 3 years ago
- ☆76Apr 23, 2020Updated 5 years ago
- A pipeline used to identify different modes of duplicated gene pairs☆117Jul 22, 2025Updated 7 months ago
- Assemble and following pipeline used in wisent genome paper.☆17Dec 23, 2016Updated 9 years ago
- WGDI: A user-friendly toolkit for evolutionary analyses of whole-genome duplications and ancestral karyotypes☆159Nov 4, 2025Updated 3 months ago
- ☆24Dec 15, 2025Updated 2 months ago
- Guide through code for a Minimmap2 genome alignment and a seq-seq-pan pan-genome alignment with visualizations in R. The tutorial present…☆19May 16, 2025Updated 9 months ago
- ☆29Jul 16, 2022Updated 3 years ago
- ☆41Jun 8, 2023Updated 2 years ago
- 生物信息学入门的系列课程,包括Linux, shell, Python 编程,建库测序,基因组学,以及系统进化,常用软件使用等内容。☆22Sep 16, 2021Updated 4 years ago
- A stand-alone application for constructing websites for visualizing and browsing synteny blocks☆18Jan 11, 2021Updated 5 years ago
- Python library to facilitate genome assembly, annotation, and comparative genomics☆890Feb 15, 2026Updated 2 weeks ago
- ☆16May 7, 2023Updated 2 years ago
- Python package and CLI for whole-genome duplication related analyses. **This package is deprecated in favor of** https://github.com/heche…☆86Jan 6, 2026Updated last month
- ☆26Jan 26, 2026Updated last month
- source code for EVM☆122Nov 29, 2024Updated last year
- cgat-apps repository☆34Apr 9, 2025Updated 10 months ago
- BITACORA: A Bioinformatics tool for gene family annotation☆53Dec 10, 2025Updated 2 months ago
- conserved non-coding sequence☆16Feb 21, 2022Updated 4 years ago
- ☆17Oct 21, 2024Updated last year
- A genome assembly assessment pipeline.☆37Nov 20, 2023Updated 2 years ago
- Analyze changes in gene family size and provide a statistical foundation for evolutionary inferences.☆119Apr 7, 2021Updated 4 years ago
- Useful bioinformatic scripts☆60Feb 23, 2026Updated last week
- ☆86Jul 12, 2024Updated last year
- Custom scripts for monotreme genome project☆19Jan 12, 2021Updated 5 years ago
- Python library to identify Identical By State regions☆22Mar 19, 2023Updated 2 years ago
- ☆13Nov 15, 2017Updated 8 years ago
- Newick tree processing☆13Feb 22, 2026Updated last week
- Multi-level visualization of genomic statistical variables on rectangular chromosomes☆44Feb 24, 2026Updated last week
- Estimating gene family turnover rates by likelihood-based methods☆12Aug 17, 2020Updated 5 years ago
- Workflow for Building Microsynteny Networks☆60Jul 30, 2022Updated 3 years ago
- ExOrthist: a pipeline to extract exon orthologies at any evolutionary distance.☆25Dec 5, 2024Updated last year
- Methods and recipes for Plant Genome Annotation - Transposable Elements☆20Jun 10, 2025Updated 8 months ago
- The code used in the manuscript titled "Gene duplication and evolution in recurring polyploidization-diploidization cycles in plants".☆29Mar 19, 2021Updated 4 years ago
- A Python package for testing evolutionary hypotheses in genome-wide approaches.☆33Mar 5, 2021Updated 4 years ago
- DeepBSA is a novel bulked segregant analysis (BSA) software for the dissection of complex traits.☆22Aug 6, 2024Updated last year