SunPengChuan / wgdi-exampleLinks
☆20Updated 10 months ago
Alternatives and similar repositories for wgdi-example
Users that are interested in wgdi-example are comparing it to the libraries listed below
Sorting:
- ☆28Updated 3 years ago
- Yet another Hi-C scaffolding tool☆22Updated 11 months ago
- Software GMATA for SSR mining, marker designing, genotyping, plot etc.☆15Updated last week
- TransposonPSI involves a PSI-blast search of a protein or nucleotide sequence against a set of profiles of proteins corresponding to majo…☆14Updated 5 years ago
- Robust identification of orthologous Synteny with the Orthology Index☆31Updated last month
- YAGCloser: Yet-Another-Gap-Closer based on spanning of long reads.☆13Updated 2 years ago
- We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …☆29Updated 3 years ago
- An R package to identify and classify duplicated genes from whole-genome protein sequence data☆28Updated last month
- Diploid genome assembly analysis tools☆14Updated last year
- reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph☆17Updated 2 years ago
- GeneMark-ETP: gene finding in eukaryotic genomes supported by transcriptome sequencing and protein homology☆25Updated 6 months ago
- chloroplast genome assembly using long reads data☆13Updated 3 months ago
- A complete telomere-to-telomere assembly of sheep: T2T-sheep1.0☆20Updated 11 months ago
- Wrapper script to concatenate, align, and construct phylogenetic trees of BUSCOs☆20Updated 6 years ago
- Convert Tandem Repeat Finder dat file output into gff3 format☆28Updated 9 months ago
- Python scripts to run tandem repeat finder program (Benson, 1999) and parse the results☆12Updated 6 years ago
- Synteny Mapping and Analysis Program☆27Updated last week
- CAAStools is a bioinformatics toolbox that allows the user to identify and validate CAAS on MSA of orthologous proteins.☆21Updated last year
- Gene Family Annotation Workflow☆11Updated last year
- ☆16Updated 2 years ago
- Generate pan-gene sets, given a collection of genome assemblies and corresponding gene models.☆17Updated last month
- Computational Analysis of Gene Expression Evolution☆43Updated last month
- ☆27Updated 6 months ago
- ☆39Updated 11 months ago
- MCMCtree tutorials☆24Updated last year
- The tools are used for displaying hic signal of genome☆24Updated 4 years ago
- a tree splitting and pruning algorithm for retrieving single-copy orthologs from gene family trees☆26Updated 3 weeks ago
- Whole organelle genome-wide alignment construction method, which ultilizes BLAST tool, to facilitate phylogeny analysis☆13Updated 2 years ago
- A Python package for testing evolutionary hypotheses in genome-wide approaches.☆31Updated 4 years ago
- A genome annotation pipeline that use short and long sequencing reads alignments from animal genomes☆30Updated last year