SunPengChuan / wgdi-exampleLinks
☆24Updated last month
Alternatives and similar repositories for wgdi-example
Users that are interested in wgdi-example are comparing it to the libraries listed below
Sorting:
- ☆29Updated 3 years ago
- Yet another Hi-C scaffolding tool☆22Updated last year
- Gene Family Annotation Workflow☆11Updated last year
- Synteny Mapping and Analysis Program☆30Updated this week
- A complete telomere-to-telomere assembly of sheep: T2T-sheep1.0☆21Updated last year
- Convert Tandem Repeat Finder dat file output into gff3 format☆30Updated 2 months ago
- YAGCloser: Yet-Another-Gap-Closer based on spanning of long reads.☆12Updated 2 months ago
- GeneMark-ETP: gene finding in eukaryotic genomes supported by transcriptome sequencing and protein homology☆26Updated 9 months ago
- TransposonPSI involves a PSI-blast search of a protein or nucleotide sequence against a set of profiles of proteins corresponding to majo…☆14Updated 5 years ago
- A pipeline for genomic variant detection with genome assemblies at population scale☆36Updated 7 months ago
- ☆29Updated 2 years ago
- reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph☆18Updated 2 years ago
- Generate pan-gene sets, given a collection of genome assemblies and corresponding gene models.☆20Updated 3 weeks ago
- Software GMATA for SSR mining, marker designing, genotyping, plot etc.☆17Updated 3 months ago
- We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …☆31Updated 4 years ago
- ☆15Updated 4 years ago
- ☆14Updated 3 months ago
- ☆27Updated 5 months ago
- Wrapper script to concatenate, align, and construct phylogenetic trees of BUSCOs☆20Updated 6 years ago
- ☆27Updated 2 years ago
- An R package to identify and classify duplicated genes from whole-genome protein sequence data☆30Updated 4 months ago
- Diploid genome assembly analysis tools☆14Updated last year
- A tool for performing collinearity-incorporating homology inference☆33Updated 2 years ago
- Simple tools for working with Hi-C data☆18Updated 7 years ago
- ☆16Updated 2 years ago
- A genome annotation pipeline that use short and long sequencing reads alignments from animal genomes☆30Updated last year
- Dynamic Elongation of a Genome Assembly Path☆25Updated last month
- The tools are used for displaying hic signal of genome☆24Updated 5 years ago
- This is a method to find telomeres and centromeres in plants.☆42Updated 2 years ago
- T2Tools is a toolset contains several tools for T2T assembly, and it is under development.☆15Updated 4 months ago