biocorecrg / ExOrthistLinks
ExOrthist: a pipeline to extract exon orthologies at any evolutionary distance.
☆25Updated 7 months ago
Alternatives and similar repositories for ExOrthist
Users that are interested in ExOrthist are comparing it to the libraries listed below
Sorting:
- Improving gene isoform quantification with miniQuant☆22Updated last week
- ☆26Updated 3 years ago
- Split-read pipeline for the identification of non-reference TE insertions with TSDs☆25Updated 4 years ago
- ☆19Updated 2 years ago
- conserved non-coding sequence☆14Updated 3 years ago
- Distribution of TEs and their relationship to genes in host genome☆22Updated 2 years ago
- A pipeline for identifying conserved topologically associating domain boundaries among multiple species.☆15Updated last month
- TEMP is a software package for detecting transposable elements (TEs) insertions and excisions from pooled high-throughput sequencing dat…☆22Updated 7 years ago
- ☆37Updated 5 years ago
- ☆16Updated 4 years ago
- Hi-C Interaction Frequency Inference (HIFI): High-resolution estimation of DNA-DNA interaction frequency from Hi-C data☆24Updated 2 years ago
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Updated 3 months ago
- ☆36Updated 2 years ago
- A pipeline to detect chimeric transcripts derived from genes and transposable elements.☆30Updated 2 months ago
- Identify and annotate TE-mediated insertions in long-read sequence data☆42Updated last week
- ☆19Updated 11 months ago
- ERVcaller is a tool designed to accurately detect and genotype non-reference unfixed endogenous retroviruses (ERVs) and other transposabl…☆13Updated last year
- “When everything is connected to everything else, for better or worse, everything matters.” Bruce Mau☆19Updated 5 years ago
- CNEFinder: Finding Conserved Non-coding Elements in Genomes☆24Updated 3 years ago
- Human pan-genome analysis pipeline☆30Updated 5 years ago
- microRNA PREdiction From small RNA-seq data☆29Updated 7 years ago
- Summarise and plot data from long-read ONT (direct RNA/cDNA) BAM files☆14Updated last year
- A genome annotation pipeline that use short and long sequencing reads alignments from animal genomes☆30Updated last year
- An accurate repeat detection from Nanopore data using deep learning and image techniques☆22Updated 2 years ago
- Invertory of TE-gene isoforms☆11Updated last year
- DNA multiple sequence aligner, official version from Penn State's Miller Lab☆35Updated 6 years ago
- A method for measuring chromosome-specific telomere length from long reads☆21Updated last year
- Transposable Elements MOvement detection using LOng reads☆22Updated last month
- ☆24Updated 2 years ago
- Enabling differential allele-specific analysis☆11Updated 6 months ago