wk8910 / bio_toolsLinks
Useful bioinformatic scripts
☆57Updated 7 months ago
Alternatives and similar repositories for bio_tools
Users that are interested in bio_tools are comparing it to the libraries listed below
Sorting:
- NLR-Annotator upload☆68Updated last year
- Scripts and other material for the assembly and analysis of ratite genomes.☆26Updated 2 years ago
- A collection of scripts for working with Hi-C data, Juicebox, and other genomic file formats☆66Updated 4 years ago
- Pan-genome Construction and Population Structure Variation Calling pipeline☆41Updated 9 months ago
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆57Updated 2 years ago
- GCE (genomic charactor estimator) is a bayes model based method to estimate the genome size, genomic repeat content and the heterozygsis…☆51Updated 5 years ago
- Few scripts facilitating the extraction of info from Repeat Masker .out files☆80Updated 4 years ago
- Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.☆55Updated 2 weeks ago
- PhyloAcc a software to detect the changes of conservation of a genomic region☆32Updated 2 months ago
- ☆44Updated 8 years ago
- Mapping pipeline for data generated using Arima-HiC☆78Updated last year
- ☆43Updated last year
- A program to call variants from genome alignment☆80Updated last month
- A shiny application to visualize MCscan result☆36Updated 2 years ago
- Genomic related tools☆71Updated 3 years ago
- Pipelines and tools for the processing of ancient and modern HTS data.☆47Updated 3 weeks ago
- VCF2Dis: an ultra-fast and efficient tool to calculate pairwise genetic distance and construct population phylogeny from VCF files☆42Updated last month
- A fast tool for detecting and decomposing segmental duplications in genome assemblies☆48Updated last year
- DNA序列比对结果 可视化展示工具☆52Updated 2 years ago
- Tools for working with second gen assemblies, fasta sequences, etc☆93Updated 8 years ago
- This is an archive version of old RepBase library (v20170127) for RepeatMasker.☆36Updated 4 years ago
- The code used in the manuscript titled "Gene duplication and evolution in recurring polyploidization-diploidization cycles in plants".☆28Updated 4 years ago
- A software to assemble chloroplast and mitochodrial genomes using PacBio data☆40Updated 5 years ago
- A novel genome assembly pipeline based on deep learning☆62Updated 6 months ago
- Here, we sequence and de novo assemble chromosome-scale genomes of nine wild species and two cultivated accessions of tomato and construc…☆54Updated last year
- Genome annotation pipeline☆59Updated last year
- Plant genome assembly and annotation pipeline using snakemake☆44Updated last month
- Tools for improving the sensitivity and specificity of genome alignments☆57Updated last year
- Tutorial about R package PopGenome☆41Updated 6 years ago
- ☆77Updated 5 years ago