wk8910 / bio_tools
Useful bioinformatic scripts
☆56Updated 5 months ago
Alternatives and similar repositories for bio_tools
Users that are interested in bio_tools are comparing it to the libraries listed below
Sorting:
- A collection of scripts for working with Hi-C data, Juicebox, and other genomic file formats☆67Updated 3 years ago
- Few scripts facilitating the extraction of info from Repeat Masker .out files☆80Updated 3 years ago
- NLR-Annotator upload☆65Updated last year
- Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.☆54Updated 2 weeks ago
- Pan-genome Construction and Population Structure Variation Calling pipeline☆38Updated 8 months ago
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆55Updated 2 years ago
- Scripts and other material for the assembly and analysis of ratite genomes.☆26Updated 2 years ago
- ☆43Updated 8 years ago
- Multi-level visualization of genomic statistical variables on rectangular chromosomes☆89Updated 5 months ago
- BITACORA: A Bioinformatics tool for gene family annotation☆44Updated last year
- A program to call variants from genome alignment☆80Updated 2 weeks ago
- GCE (genomic charactor estimator) is a bayes model based method to estimate the genome size, genomic repeat content and the heterozygsis…☆50Updated 5 years ago
- Tutorial about R package PopGenome☆41Updated 6 years ago
- Mapping pipeline for data generated using Arima-HiC☆76Updated 11 months ago
- Pipelines and tools for the processing of ancient and modern HTS data.☆47Updated last month
- VCF2Dis: an ultra-fast and efficient tool to calculate pairwise genetic distance and construct population phylogeny from VCF files☆41Updated last month
- This is an archive version of old RepBase library (v20170127) for RepeatMasker.☆34Updated 4 years ago
- A novel genome assembly pipeline based on deep learning☆62Updated 5 months ago
- ☆43Updated last year
- Genome annotation pipeline☆59Updated 10 months ago
- A shiny application to visualize MCscan result☆36Updated 2 years ago
- LTR_Finder is an efficient program for finding full-length LTR retrotranspsons in genome sequences.☆47Updated last year
- Tools for working with second gen assemblies, fasta sequences, etc☆93Updated 8 years ago
- A python script for finding telomeric repeats (TTAGGG/CCCTAA) in FASTA files☆34Updated 2 years ago
- De novo annotation of young retrotransposons☆48Updated 3 years ago
- A software to assemble chloroplast and mitochodrial genomes using PacBio data☆39Updated 4 years ago
- DNA序列比对结果 可视化展示工具☆50Updated 2 years ago
- Genome Annotation Pipeline☆35Updated 8 months ago
- Scripts and procedures for detecting positively selected genes and codons in primates☆21Updated 4 years ago
- BamDeal: a comprehensive toolkit for bam manipulation☆53Updated 2 years ago