RacconC / gtftools
☆13Updated last year
Related projects ⓘ
Alternatives and complementary repositories for gtftools
- An R package to identify and classify duplicated genes from whole-genome protein sequence data☆11Updated last month
- A pipeline for identifying conserved topologically associating domain boundaries among multiple species.☆13Updated 4 months ago
- Code associated with the manuscript "A complete reference genome improves analysis of human genetic variation".☆17Updated last year
- Genotyping of segregating mobile elements insertions☆19Updated 3 years ago
- Some useful bioinformatics pipelines for genomics analysis☆14Updated 3 years ago
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Updated 3 weeks ago
- ☆15Updated 2 years ago
- Split-read pipeline for the identification of non-reference TE insertions with TSDs☆24Updated 4 years ago
- DNA multiple sequence aligner, official version from Penn State's Miller Lab☆31Updated 5 years ago
- ExOrthist: a pipeline to extract exon orthologies at any evolutionary distance.☆21Updated 2 weeks ago
- conserved non-coding sequence☆14Updated 2 years ago
- ERVcaller is a tool designed to accurately detect and genotype non-reference unfixed endogenous retroviruses (ERVs) and other transposabl…☆14Updated 10 months ago
- CNEFinder: Finding Conserved Non-coding Elements in Genomes☆22Updated 3 years ago
- HAT is a set of tools for calling de novo variants from whole-genome sequencing data.☆23Updated 8 months ago
- ☆16Updated 4 years ago
- Enabling differential allele-specific analysis☆11Updated 2 years ago
- toolkit to process gtf files☆16Updated 2 years ago
- Direct RNA publication scripts☆11Updated 7 years ago
- ☆17Updated last year
- ☆14Updated 6 years ago
- A scaffold assembling pipeline for stLFR reads.☆15Updated 3 years ago
- ☆14Updated 11 months ago
- Invertory of TE-gene isoforms☆9Updated last year
- A pipeline to identify gene family using mutiple tools and scripts.☆11Updated 3 years ago
- A long-read SV calling pipeline☆11Updated 3 years ago
- defusion☆14Updated 3 years ago
- RNA-seq analysis scripts☆15Updated 2 years ago
- I often use some of the self-written programs.☆15Updated 7 months ago
- ☆22Updated 2 years ago
- A stand-alone application for constructing websites for visualizing and browsing synteny blocks☆18Updated 3 years ago