Alternatives and similar repositories for Scripts

Users that are interested in Scripts are comparing it to the libraries listed below

• steuernb / NLR-Annotator
  NLR-Annotator upload
  ☆68Updated last year
• 4ureliek / Parsing-RepeatMasker-Outputs
  Few scripts facilitating the extraction of info from Repeat Masker .out files
  ☆81Updated 4 years ago
• Sunhh / NGS_data_processing
  Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.
  ☆55Updated last month
• chenlianfu / geta
  ☆80Updated last year
• xuzhougeng / Genomic_tools
  Genomic related tools
  ☆71Updated 3 years ago
• BGI-shenzhen / RectChr
  Multi-level visualization of genomic statistical variables on rectangular chromosomes
  ☆93Updated 7 months ago
• BGI-shenzhen / VCF2Dis
  VCF2Dis: A new simple and efficient software to calculate p-distance matrix and construct population phylogeny based Variant Call Forma…
  ☆97Updated 2 months ago
• hyphaltip / genome-scripts
  Genome Scripts used in fungal comparative genomics
  ☆67Updated 4 years ago
• wk8910 / bio_tools
  Useful bioinformatic scripts
  ☆57Updated 7 months ago
• xiaochuanle / MECAT2
  ☆71Updated 5 years ago
• meiyang12 / Genome-annotation-pipeline
  Genome annotation pipeline
  ☆59Updated last year
• liangclab / HERA
  ☆77Updated 5 years ago
• YangJianshun / LINKVIEW2
  DNA序列比对结果 可视化展示工具
  ☆52Updated 2 years ago
• yjx1217 / RMRB
  This is an archive version of old RepBase library (v20170127) for RepeatMasker.
  ☆36Updated 4 years ago
• oushujun / LTR_FINDER_parallel
  A parallel wrapper for LTR_FINDER
  ☆52Updated 3 months ago
• sujaikumar / assemblage
  Tools for working with second gen assemblies, fasta sequences, etc
  ☆93Updated 8 years ago
• tsackton / ratite-genomics
  Scripts and other material for the assembly and analysis of ratite genomes.
  ☆26Updated 2 years ago
• fanagislab / GCE
  GCE (genomic charactor estimator) is a bayes model based method to estimate the genome size, genomic repeat content and the heterozygsis…
  ☆51Updated 5 years ago
• solgenomics / SNPbinner
  SNPbinner is a utility for the generation of genotype crossover points and binmaps based on SNP data across recombinant inbred lines.
  ☆37Updated 6 years ago
• thlee / SNPhylo
  A pipeline to generate a phylogenetic tree from huge SNP data
  ☆88Updated last year
• LKremer / CAFE_fig
  A tool to extract and visualize the results of CAFE (Computational Analysis of gene Family Evolution)
  ☆62Updated 5 years ago
• hardingnj / xpclr
  Code to compute the XP-CLR statistic to infer natural selection
  ☆98Updated 3 years ago
• molevol-ub / bitacora
  BITACORA: A Bioinformatics tool for gene family annotation
  ☆46Updated last month
• phasegenomics / juicebox_scripts
  A collection of scripts for working with Hi-C data, Juicebox, and other genomic file formats
  ☆67Updated 4 years ago
• YuSugihara / QTL-seq
  QTL-seq pipeline to identify causative mutations responsible for a phenotype
  ☆55Updated 5 months ago
• ArimaGenomics / mapping_pipeline
  Mapping pipeline for data generated using Arima-HiC
  ☆78Updated last year
• wurmlab / flo
  Same species annotation lift over pipeline.
  ☆98Updated last year
• irusri / Extract-intron-from-gff3
  This script will extract the intron feature gff3 and sequence from gene_exon gff3 and fasta file.
  ☆33Updated 6 years ago
• lfaino / LoReAn
  Long Reads Annotation pipeline
  ☆72Updated 3 years ago
• arzwa / wgd
  Python package and CLI for whole-genome duplication related analyses. **This package is deprecated in favor of** https://github.com/heche…
  ☆85Updated last year