JinfengChen / ScriptsLinks
☆74Updated 5 years ago
Alternatives and similar repositories for Scripts
Users that are interested in Scripts are comparing it to the libraries listed below
Sorting:
- Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.☆55Updated last week
- Genomic related tools☆71Updated 3 years ago
- NLR-Annotator upload☆71Updated 2 years ago
- Few scripts facilitating the extraction of info from Repeat Masker .out files☆81Updated 4 years ago
- ☆71Updated 5 years ago
- ☆77Updated 5 years ago
- VCF2Dis: A new simple and efficient software to calculate p-distance matrix and construct population phylogeny based Variant Call Forma…☆97Updated 3 months ago
- ☆60Updated last year
- Genome Scripts used in fungal comparative genomics☆67Updated 4 years ago
- ☆82Updated last year
- Python package and CLI for whole-genome duplication related analyses. **This package is deprecated in favor of** https://github.com/heche…☆85Updated last year
- Multi-level visualization of genomic statistical variables on rectangular chromosomes☆95Updated last week
- DNA序列比对结果 可视化展示工具☆53Updated 2 years ago
- This script will extract the intron feature gff3 and sequence from gene_exon gff3 and fasta file.☆33Updated 6 years ago
- GCE (genomic charactor estimator) is a bayes model based method to estimate the genome size, genomic repeat content and the heterozygsis…☆53Updated 5 years ago
- Useful bioinformatic scripts☆58Updated 9 months ago
- A tool to extract and visualize the results of CAFE (Computational Analysis of gene Family Evolution)☆63Updated 5 years ago
- Genome annotation pipeline☆60Updated last year
- TransposonUltimate - a holistic set of tools for transposon identification☆84Updated 3 years ago
- Hapmap-v1☆12Updated 5 years ago
- A parallel wrapper for LTR_FINDER☆54Updated 5 months ago
- Here, we sequence and de novo assemble chromosome-scale genomes of nine wild species and two cultivated accessions of tomato and construc…☆58Updated last year
- A pipeline to generate a phylogenetic tree from huge SNP data☆90Updated last year
- QTL-seq pipeline to identify causative mutations responsible for a phenotype☆55Updated 6 months ago
- Neural network classification of TE☆92Updated 2 months ago
- Code to compute the XP-CLR statistic to infer natural selection☆98Updated 3 years ago
- BITACORA: A Bioinformatics tool for gene family annotation☆47Updated 2 months ago
- A novel genome assembly pipeline based on deep learning☆64Updated 8 months ago
- A collection of scripts for working with Hi-C data, Juicebox, and other genomic file formats☆67Updated 4 years ago
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆58Updated 2 years ago