ijustwanthaveaname / Genefamily_pipelineLinks
A pipeline to identify gene family using mutiple tools and scripts.
☆11Updated 4 years ago
Alternatives and similar repositories for Genefamily_pipeline
Users that are interested in Genefamily_pipeline are comparing it to the libraries listed below
Sorting:
- ExOrthist: a pipeline to extract exon orthologies at any evolutionary distance.☆25Updated last year
- Split-read pipeline for the identification of non-reference TE insertions with TSDs☆25Updated 5 years ago
- iTAK☆45Updated last year
- ☆37Updated last year
- ☆16Updated 3 years ago
- ☆21Updated 6 years ago
- HomBlocks: A multiple-alignment construction pipeline for organelle phylogenomics based on locally collinear block searching☆35Updated 8 years ago
- A pipeline for identifying conserved topologically associating domain boundaries among multiple species.☆16Updated 5 months ago
- Code for TAD_SV project☆11Updated 3 years ago
- microRNA PREdiction From small RNA-seq data☆29Updated 7 years ago
- Easily construct the ML species tree with single-copy gene shared by different species.☆27Updated 7 years ago
- new repo☆28Updated 4 years ago
- TEMP is a software package for detecting transposable elements (TEs) insertions and excisions from pooled high-throughput sequencing dat…☆22Updated 8 years ago
- fastx-utils using klib☆20Updated 5 years ago
- Long read to rMATS☆32Updated 2 years ago
- Simple library/pipeline to generate and handle Hi-C data.☆39Updated last year
- ☆17Updated 5 months ago
- Python scripts for matching output of Pacific Biosciences IsoSeq RNA-seq pipeline to an annotation file.☆23Updated 10 years ago
- ☆28Updated 3 years ago
- ☆32Updated last year
- A Python package for testing evolutionary hypotheses in genome-wide approaches.☆32Updated 4 years ago
- This is a series of scripts on the rapid construction of target interval consensus sequences from bam files and the rapid construction of…☆17Updated last year
- ☆28Updated 3 years ago
- Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.☆56Updated 3 weeks ago
- Yet another Hi-C scaffolding tool☆22Updated last year
- A genome annotation pipeline that use short and long sequencing reads alignments from animal genomes☆30Updated last year
- ☆23Updated 3 years ago
- An accurate repeat detection from Nanopore data using deep learning and image techniques☆24Updated 2 years ago
- Human pan-genome analysis pipeline☆31Updated 5 years ago
- A pipeline for isoseq☆23Updated 7 years ago