xuzhougeng / Genomic_toolsLinks
Genomic related tools
☆71Updated 3 years ago
Alternatives and similar repositories for Genomic_tools
Users that are interested in Genomic_tools are comparing it to the libraries listed below
Sorting:
- Multi-level visualization of genomic statistical variables on rectangular chromosomes☆95Updated last week
- ☆82Updated last year
- tomato graph pangenome☆84Updated 2 years ago
- DNA序列比对结果 可视化展示工具☆54Updated 2 years ago
- NLR-Annotator upload☆71Updated 2 years ago
- VCF2Dis: A new simple and efficient software to calculate p-distance matrix and construct population phylogeny based Variant Call Forma…☆97Updated 3 months ago
- ☆71Updated 5 years ago
- source code for EVM☆116Updated 9 months ago
- Here, we sequence and de novo assemble chromosome-scale genomes of nine wild species and two cultivated accessions of tomato and construc…☆58Updated last year
- Few scripts facilitating the extraction of info from Repeat Masker .out files☆81Updated 4 years ago
- Genome annotation pipeline☆60Updated last year
- A pipeline used to identify different modes of duplicated gene pairs☆106Updated last month
- Detailed bioinformatics scripts and methods used in the NAM genome paper.☆83Updated 7 months ago
- GCE (genomic charactor estimator) is a bayes model based method to estimate the genome size, genomic repeat content and the heterozygsis…☆53Updated 5 years ago
- WGDI: A user-friendly toolkit for evolutionary analyses of whole-genome duplications and ancestral karyotypes☆143Updated 7 months ago
- A novel genome assembly pipeline based on deep learning☆64Updated 8 months ago
- Application of pan-genome for population☆108Updated 10 months ago
- This is the standalone version of the EviAnn pipeline☆115Updated last week
- Collection of tools for the analysis of CpG data☆90Updated last month
- ☆74Updated 5 years ago
- Workflow for Building Microsynteny Networks☆56Updated 3 years ago
- ☆77Updated 5 years ago
- PacBio Assembly Tool Suite: Reads in ⇨ Assembly out☆118Updated 4 years ago
- Python package and CLI for whole-genome duplication related analyses. **This package is deprecated in favor of** https://github.com/heche…☆85Updated last year
- A tool to extract and visualize the results of CAFE (Computational Analysis of gene Family Evolution)☆63Updated 5 years ago
- Mapping pipeline for data generated using Arima-HiC☆80Updated last year
- A collection of scripts for working with Hi-C data, Juicebox, and other genomic file formats☆67Updated 4 years ago
- Pangenome-based genome inference☆139Updated 3 weeks ago
- TEsorter: an accurate and fast method to classify LTR-retrotransposons in plant genomes☆99Updated 6 months ago
- Neural network classification of TE☆92Updated 2 months ago