hewm2008 / RectChrLinks
Multi-level visualization of genomic statistical variables on rectangular chromosomes
☆43Updated 3 weeks ago
Alternatives and similar repositories for RectChr
Users that are interested in RectChr are comparing it to the libraries listed below
Sorting:
- A tool for performing collinearity-incorporating homology inference☆33Updated 2 years ago
- Plant genome assembly and annotation pipeline using snakemake☆50Updated 7 months ago
- BITACORA: A Bioinformatics tool for gene family annotation☆51Updated last week
- ☆41Updated 2 years ago
- Genome annotation pipeline☆64Updated last year
- ☆45Updated 3 years ago
- AlleleFinder is a tool for identifying allele genes from polyploid genome.☆35Updated last week
- ☆41Updated 4 months ago
- An efficient assembly tool for plant mitochondrial genome☆65Updated last year
- An accurate and widely applicable pangenome graph-based variant genotyper for diploid and polyploid genomes☆43Updated 2 months ago
- A collection of scripts for working with Hi-C data, Juicebox, and other genomic file formats☆69Updated 4 years ago
- Resistify is a program which rapidly identifies and classifies plant resistance genes from protein sequences. It is designed to be lightw…☆40Updated last week
- PanTE: A Comprehensive Framework for Transposable Element Discovery in Graph-based Pangenomes☆24Updated 2 months ago
- VCF2Dis: an ultra-fast and efficient tool to calculate pairwise genetic distance and construct population phylogeny from VCF files☆50Updated 3 months ago
- a software for annotating plant genes☆22Updated last year
- Neural network classification of TE☆97Updated 2 months ago
- DNA序列比对结果 可视化展示工具☆56Updated 2 years ago
- C-Phasing/CPhasing: Phasing and scaffolding polyploid genomes based on Pore-C, HiFi-C/CiFi or Hi-C.☆76Updated 3 weeks ago
- a Semi-automated pipeline for assembling T2T genome☆24Updated 2 months ago
- Python script calculating transposable element density for all genes in a genome. Publication: https://mobilednajournal.biomedcentral.com…☆35Updated last year
- Pan-genome Construction and Population Structure Variation Calling pipeline☆44Updated last year
- LTR_Finder is an efficient program for finding full-length LTR retrotranspsons in genome sequences.☆51Updated last year
- PlantTribes is a collection of automated gene family analysis pipelines for comparative plant genomics☆38Updated 2 years ago
- A rapid and accurate ensemble pipeline for graph-based variant genotyping with lower depth of short reads☆48Updated 2 months ago
- A novel genome assembly pipeline based on deep learning☆67Updated last year
- ☆21Updated last year
- HiCAT new project☆29Updated 6 months ago
- scripts☆20Updated 7 years ago
- Genome Annotation Pipeline☆42Updated last year
- A parallel wrapper for LTR_FINDER☆55Updated 8 months ago