wjian8 / psvcp_v1.01

Related projects ⓘ

Alternatives and complementary repositories for psvcp_v1.01

• schneebergerlab / AMPRIL-genomes
  scripts for the project of seven thaliana genomes assembly
  ☆37Updated 3 years ago
• zy-optimistic / GAEP
  A genome assembly assessment pipeline.
  ☆36Updated 11 months ago
• baozg / assembly-annotation-pipeline
  Plant genome assembly and annotation pipeline using snakemake
  ☆35Updated last year
• simon19891216 / CentIER
  ☆21Updated 2 months ago
• baduelp / public
  ☆16Updated last month
• Yandell-Lab / maker
  Genome Annotation Pipeline
  ☆32Updated 2 months ago
• baozg / phased-assembly-check
  ☆28Updated 2 months ago
• amsession / Kmer-based-Subgenome-Mapping
  ☆20Updated 3 months ago
• alachins / sweed
  Likelihood-based Selective Sweep Detection
  ☆35Updated last year
• ShuaiNIEgithub / Centromics
  Centromics: visualing centromeres with multiple omics data
  ☆17Updated 9 months ago
• hewm2008 / VCF2Dis
  VCF2Dis: A new simple and efficient software to calculate p-distance matrix and construct population phylogeny based Variant Call Format
  ☆27Updated last month
• carolindahms / TreeMix
  Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates…
  ☆22Updated 8 months ago
• JM-SONG / GenomeSyn
  ☆21Updated 2 years ago
• zhangrengang / Centromics
  Centromics: visualing centromeres with multiple omics data
  ☆22Updated this week
• Farre-lab / syntenyPlotteR
  R package to draw syntenic plots in 3 different styles
  ☆39Updated 11 months ago
• tangerzhang / calc_switchErr
  ☆24Updated 2 years ago
• vgteam / giraffe-sv-paper
  ☆40Updated 6 months ago
• ellenbell / FasTE
  A quick user guide for de novo transposable element (TE) library generation and TE screening. Utilising; the Extensive de novo TE Annotat…
  ☆27Updated last year
• ShiuLab / PseudogenePipeline
  ☆36Updated last year
• amvarani / Plant_Annotation_TEs
  Methods and recipes for Plant Genome Annotation - Transposable Elements
  ☆18Updated last year
• lardo / khaper
  ☆28Updated 2 years ago
• srividya22 / geneLift
  Gene model transfer from closely related reference genomes using cDNA alignments
  ☆10Updated 4 years ago
• obenno / ShinySyn
  A shiny application to visualize MCscan result
  ☆33Updated 2 years ago
• slimsuite / chromsyn
  Chromosome-level synteny plotting using orthologous regions
  ☆28Updated last month
• i10labtitech / GINGER
  ☆23Updated 9 months ago
• JiaoLab2021 / SynDiv
  A tool for quick and accurate calculation of syntenic diversity.
  ☆29Updated 2 months ago
• SwiftSeal / resistify
  Resistify is a command line program that identifies and classifies NLRs from protein sequences
  ☆26Updated this week
• yongzhiyang2012 / genome_analysis
  ☆14Updated 4 years ago
• clemgoub / rm2gff3
  Convert RepeatMasker ".out" file into a gff3 with colors!!!
  ☆19Updated 4 years ago
• lurebgi / chicken-T2T
  Scripts that used in our chicken T2T manuscript.
  ☆18Updated last year