Chenglin20170390 / Haplotype-diversity
This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato breeding“
☆27Updated last month
Alternatives and similar repositories for Haplotype-diversity:
Users that are interested in Haplotype-diversity are comparing it to the libraries listed below
- ☆27Updated 3 years ago
- Centromics: visualing centromeres with multiple omics data☆22Updated 2 weeks ago
- A genome assembly assessment pipeline.☆37Updated last year
- Dynamic Elongation of a Genome Assembly Path☆21Updated 10 months ago
- ☆29Updated 2 months ago
- Plant genome assembly and annotation pipeline using snakemake☆42Updated last year
- A tool for quick and accurate calculation of syntenic diversity.☆35Updated 2 months ago
- ☆21Updated last year
- ☆23Updated 3 years ago
- ☆20Updated 7 months ago
- ☆29Updated 6 months ago
- ☆39Updated last year
- This is a method to find telomeres and centromeres in plants.☆39Updated last year
- Automated pipeline for running CoalHMM☆12Updated last year
- ☆29Updated this week
- Use hifi to assembly the Sol genome, and dissecting Sol evo☆17Updated last year
- scripts for the project of seven thaliana genomes assembly☆38Updated 3 years ago
- Analyses of sex chromosome evolution in songbirds☆15Updated 5 years ago
- This is a workflow that combines multiple software, mainly for whole genome annotation of eukaryotes.☆22Updated last year
- A tool for performing collinearity-incorporating homology inference☆29Updated last year
- Genome haplotype assembly and assessment method☆12Updated last year
- HiCAT new project☆27Updated last year
- ☆22Updated last year
- A rapid and accurate ensemble pipeline for graph-based variant genotyping with lower depth of short reads☆37Updated 8 months ago
- ☆12Updated 5 years ago
- An accurate and widely applicable pangenome graph-based variant genotyper for diploid and polyploid genomes☆22Updated 2 weeks ago
- Python scripts to run tandem repeat finder program (Benson, 1999) and parse the results☆12Updated 6 years ago
- ☆15Updated 3 months ago
- ☆27Updated 2 years ago