evotools / CattleGraphGenomePaper
Set of script for the paper on the cattle graph genome
☆13Updated 2 years ago
Alternatives and similar repositories for CattleGraphGenomePaper:
Users that are interested in CattleGraphGenomePaper are comparing it to the libraries listed below
- Scripts used to perform analyses in Rice et al. (2023)☆15Updated last year
- Construct and Analyze the North American Vitis pangenome☆22Updated last year
- Long Read Based SV Calling Tools Analysis☆13Updated last year
- ☆15Updated 3 years ago
- Tools for haplotype-wise reconstruction of pseudomolecules☆20Updated 5 months ago
- Study of TE evolution in a population of genomes☆9Updated last year
- plot genome alignment synteny☆21Updated 4 years ago
- Some useful bioinformatics pipelines for genomics analysis☆14Updated 3 years ago
- A Hi-C scaffolding method☆22Updated 3 years ago
- ☆12Updated 4 years ago
- A loose collection of scripts and utilities for processing and analyzing the Goat reference genome assembly☆11Updated 8 years ago
- Scripts to do haplotype analysis on pan genomes.☆21Updated 4 years ago
- parallelLastz: Running Lastz in parallel☆15Updated 6 months ago
- Simple tools for working with Hi-C data☆17Updated 6 years ago
- Cantù Lab @ UC Davis - Annotation pipeline - EVM based☆14Updated 4 months ago
- issues for semina "Data Visulization"☆13Updated this week
- ☆15Updated 2 weeks ago
- SINE annotation tool for plant genomes☆17Updated last year
- ☆15Updated last year
- Genome alignment and synteny plots☆29Updated last year
- A pipeline for scaffolding a genome assembly using Hi-C☆13Updated 2 years ago
- Reduction of Althaps and Duplicate Contigs for Improved Hi-C Scaffolding☆20Updated 3 weeks ago
- B73Ab10 genome assembly methods☆16Updated 3 years ago
- Pipeline for genome scaffolding by modelling distributions of HiC pairs☆10Updated 2 years ago
- A program to generate a graph which presents a simplified representation of several full length genomes☆12Updated 6 years ago
- ☆16Updated 5 years ago
- ☆14Updated last year
- ☆15Updated last year
- ☆14Updated 3 years ago
- Very simple and configurable all-in-one dotplot program☆12Updated last year