Rcoppee / CONSTRUCTLinks
Finding patch of conserved amino acid sites in 3D structure
☆12Updated 6 months ago
Alternatives and similar repositories for CONSTRUCT
Users that are interested in CONSTRUCT are comparing it to the libraries listed below
Sorting:
- Fast protein domain structure embedding+search tool☆26Updated 3 weeks ago
- Python framework for doing ancestral sequence reconstruction☆41Updated last year
- Virus Protein Structural Analysis Toolkit☆12Updated last year
- A fast, alignment-free method for estimating sequence conservation using protein sequence embedding☆17Updated 2 years ago
- ☆21Updated this week
- Rendering protein mutation movies from predicted 3D structures☆20Updated last year
- ☆30Updated last year
- DeepECtransformer☆28Updated last year
- Protein discovery tool for mining in the Alphafold database based on the position of few amino acids.☆25Updated this week
- ☆11Updated last year
- Detection of remote homology by comparison of protein language model representations☆55Updated 9 months ago
- ☆23Updated 2 years ago
- Local homology search powered by ESM-2 language model, foldseek, hhsuite, and hmmer.☆15Updated 9 months ago
- Code for LazyAF pipeline☆20Updated last year
- Cross-protein transfer learning for variant effect prediction☆20Updated 2 years ago
- Protein Sequence Annotation with Language Models☆24Updated 4 months ago
- GraphPart, a data partitioning method for ML on biological sequences☆30Updated last year
- Long disorder consensus predictor☆17Updated last month
- A software-suite to perform multiple protein structure alignment and structure feature extraction.☆31Updated 2 years ago
- Repository for Protein-Vec, a protein embedding mixture of experts model☆38Updated last year
- The aim of this repository is to provide simple tools to help those working with ColabFold BATCH both for pre and post-processing steps.☆16Updated last year
- The 3DFI pipeline predicts the 3D structure of proteins and searches for structural homology in the 3D space.☆20Updated last year
- NEFF Calculator and MSA File Converter☆12Updated 3 weeks ago
- ☆70Updated last year
- Fully convolutional deep learning variant effect predictor architecture☆23Updated last year
- Decoding the functional networks of non-model organisms☆11Updated 2 months ago
- Supporting repository for "Protein language models trained on multiple sequence alignments learn phylogenetic relationships" (https://www…☆17Updated 8 months ago
- Repository for "Nearest neighbor search on embeddings rapidly identifies distant protein relations"☆13Updated 2 years ago
- ☆44Updated last year
- PLMAlign utilizes per-residue embeddings as input to obtain specific alignments and more refined similarity☆20Updated last month