☆10Jan 27, 2025Updated last year
Alternatives and similar repositories for bilaterian_GE
Users that are interested in bilaterian_GE are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The IntroBlocker ancestry inference algorithm☆18Oct 24, 2023Updated 2 years ago
- ☆17Mar 17, 2023Updated 3 years ago
- ☆21Dec 13, 2024Updated last year
- conserved non-coding sequence☆18Feb 21, 2022Updated 4 years ago
- Code for assembly approach presented in "Haplotype-resolved assembly of a tetraploid potato genome using long reads and low-depth offspri…☆15Nov 20, 2023Updated 2 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- ☆15May 3, 2023Updated 3 years ago
- Genotyping lots of samples with big pangenomes☆11Oct 30, 2025Updated 8 months ago
- ☆23Oct 30, 2022Updated 3 years ago
- Efficient Permutation-based GWAS for Normal and Skewed Phenotypic Distributions☆35Nov 14, 2024Updated last year
- ☆17Aug 6, 2025Updated 11 months ago
- Efficient indexing and querying of annotations in a pangenome graph☆10Oct 29, 2025Updated 9 months ago
- Species-aware DNA language models capture regulatory elements and their evolution☆29Aug 21, 2023Updated 2 years ago
- Analyze 3'UTR usage in single-cell data.☆15Sep 25, 2021Updated 4 years ago
- ☆27Dec 3, 2025Updated 7 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- PhyloAln: a convenient reference-based tool to align sequences and high-throughput reads for phylogeny and evolution in the omic era☆18Apr 16, 2026Updated 3 months ago
- This tutorial is a guide to perform TWAS with the data used in Torres‐Rodríguez, J. Vladimir, et al. "Population‐level gene expression ca…☆26Feb 23, 2026Updated 5 months ago
- A viewer for multiple alignment format (MAF) files in JBrowse 2☆14Jun 3, 2026Updated last month
- Multiple sequence alignment of long tandem repeats☆30Jun 23, 2026Updated last month
- Here, we de novo assembled 110 representative Setaria accessions from a worldwide collected 1,844 variteies, and performed pan-/graph- ge…☆30Sep 13, 2023Updated 2 years ago
- This is the script used for analysis the population data of alfalfa☆11May 22, 2024Updated 2 years ago
- Bash scripts and data used in pantranscriptomic paper☆24Oct 21, 2022Updated 3 years ago
- A genome-scale, fast, and precise segmental duplications mapping tool☆36Sep 11, 2024Updated last year
- Methylation analysis pipeline for genome graph☆15May 25, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A versatile framework for single-cell transcriptomic data analysis in plants.☆23Mar 11, 2024Updated 2 years ago
- This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…☆40Oct 29, 2025Updated 9 months ago
- GenomeTools: Scripts and Classes for Working with Genomic Data☆12Jun 7, 2018Updated 8 years ago
- Set of script for the paper on the cattle graph genome☆14Jan 10, 2023Updated 3 years ago
- Project description and analytic scripts for cis/trans regulation of fiber development in G. hirsutum☆18Dec 19, 2023Updated 2 years ago
- Publication Page for the Noack et al. 2021 Nature Neuroscience paper☆10Feb 7, 2022Updated 4 years ago
- a tool to evaluate long-read error correction mainly with PacBio High-Fidelity Reads (HiFi reads).☆20Dec 5, 2023Updated 2 years ago
- Pangenome graphs visualisation, distance computing, reconstruction of sequences and other utility functions☆38Apr 28, 2026Updated 3 months ago
- A source code to replicate Sakaue S. et al. Nat Commun. 2020.☆15Oct 29, 2020Updated 5 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- A web-based, interactive pangenome visualization tool☆21Apr 10, 2023Updated 3 years ago
- GFA visualization tool - Rust reimplementation of odgi viz☆15May 2, 2026Updated 2 months ago
- Generate pan-gene sets, given a collection of genome assemblies and corresponding gene models.☆22Jul 14, 2026Updated 2 weeks ago
- COsine SImilarity-based Genotyper using pangenomes☆36Updated this week
- Construct and Analyze the North American Vitis pangenome☆29Aug 19, 2025Updated 11 months ago
- ☆12Feb 19, 2021Updated 5 years ago
- ☆17Jul 29, 2023Updated 3 years ago