pmelsted / AM_2024Links
Analaysis for the batch correction paper
☆10Updated last month
Alternatives and similar repositories for AM_2024
Users that are interested in AM_2024 are comparing it to the libraries listed below
Sorting:
- ☆27Updated last year
- epigenome analysis to rank transcription factors☆13Updated 5 years ago
- ☆12Updated last year
- Snakemake workflow to benchmark scRNA-seq data simulators☆13Updated 2 years ago
- Algorithms for single-cell analysis☆29Updated 3 years ago
- ☆16Updated 3 years ago
- A python package for learning mutational signatures and their multidimensional genomic properties☆14Updated 4 years ago
- ☆12Updated 4 years ago
- Visualizing Somatic Alterations of 10X Spatial Transcriptomics Data☆10Updated 7 months ago
- Efficiently compute robust markers across single-cell datasets☆11Updated 4 years ago
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆25Updated last year
- RNA velocity validation☆22Updated 3 years ago
- Vaeda method for computational doublet annotation☆16Updated 11 months ago
- Single cell STEM (scSTEM) is a shiny app based R package for visualizing and clustering genes in pseudotime ordered single cell RNA-seq d…☆18Updated 2 years ago
- ☆12Updated 4 years ago
- A method to rapidly assess cell type identity using both functional and random gene sets☆13Updated 6 years ago
- netSmooth: A Network smoothing based method for Single Cell RNA-seq imputation☆27Updated last year
- ENHANCE: Accurate denoising of single-cell RNA-Seq data (Python implementation)☆14Updated 6 years ago
- scRNAseq integration with triplet neural networks☆41Updated 2 years ago
- Code associated with MIX-seq manuscript☆15Updated 4 years ago
- Probabilistic gene expression barcodes for cell type annotation☆25Updated 3 years ago
- Automated marker-based annotation of cell types☆13Updated 2 years ago
- Method for identifying trait-relevant gene annotations from GWAS summary statistics.☆18Updated 2 years ago
- Code, data and analysis for moslin.☆12Updated 8 months ago
- Bayesian model selection to detect zero-inflated genes☆8Updated 4 years ago
- MOJITOO: a fast and universal method for integration of multimodal single cell data☆10Updated 8 months ago
- Archived version of RUVSeq☆8Updated 8 years ago
- Repository for signature genes from Immune Cell Atlas☆18Updated 5 years ago
- Calibrate and compare methods for denoising single-cell RNA-seq data☆2Updated 4 years ago
- netNMF-sc: A network regularization algorithm for dimensionality reduction and imputation of single-cell expression data☆23Updated 4 years ago