davismcc / workshop-scRNAseq-oxford-sep2016View external linksLinks
scRNA-seq workshop in Oxford on 9 September 2016
☆11Sep 7, 2016Updated 9 years ago
Alternatives and similar repositories for workshop-scRNAseq-oxford-sep2016
Users that are interested in workshop-scRNAseq-oxford-sep2016 are comparing it to the libraries listed below
Sorting:
- ☆23Jul 31, 2018Updated 7 years ago
- Preprocessing tools for unique molecular index (UMI) sequencing reads☆31Apr 25, 2023Updated 2 years ago
- See: https://www.iscb.org/ismb2018/3511#am1☆18Sep 10, 2018Updated 7 years ago
- Interface to 10x Genomics' 1.3 m single cell data set☆18Aug 2, 2018Updated 7 years ago
- ☆38Jan 21, 2026Updated 3 weeks ago
- Code for reproducing results from the paper "Modular and efficient pre-processing of single-cell RNA-seq data"☆23Feb 14, 2021Updated 5 years ago
- Marker gene profile estimation method used in NeuroExpresso manuscript☆14Jul 11, 2019Updated 6 years ago
- ☆12Jul 13, 2018Updated 7 years ago
- Code and results from TotalSeqC antibody titration and pipeline benchmarking for CITE-seq experiments☆10Mar 13, 2021Updated 4 years ago
- Metabolomics experimental design, sample metadata configuration, and sample data acquisition.☆11Jun 28, 2018Updated 7 years ago
- R Interface to the NCBI SRA metadata☆23Nov 19, 2018Updated 7 years ago
- Predicting oncogenic potential of gene fusions☆12Feb 13, 2016Updated 10 years ago
- Manage Files Across Sessions☆13Oct 30, 2025Updated 3 months ago
- Shiny app for visualization, exploration of mouse brain single cell gene expression☆11Oct 31, 2018Updated 7 years ago
- ☆14Jan 16, 2024Updated 2 years ago
- Clustering cells from single cell RNA seq assays☆46Nov 19, 2018Updated 7 years ago
- [DEPRECATED] Docker Images which include a complete installation of all software needed to build all Bioconductor packages☆25Mar 15, 2023Updated 2 years ago
- ☆13Mar 20, 2021Updated 4 years ago
- Bioconductor2017 workshop - Analysis of single-cell RNA-seq data: Normalization, dimensionality reduction, clustering, and lineage infere…☆11Aug 4, 2017Updated 8 years ago
- miscellaneous script-like stuff in go for bioinformatics☆14Nov 4, 2016Updated 9 years ago
- Integrate the cancer genomics portal, cBioPortal, using MultiAssayExperiment☆33Feb 4, 2026Updated last week
- Trigger the Google Genomics Pipeline API with CWL☆11Feb 7, 2017Updated 9 years ago
- The blog of tidyomics☆14Jul 12, 2025Updated 7 months ago
- Helper script for bioconductor/bioconductor_docker☆13Updated this week
- ☆29Feb 1, 2023Updated 3 years ago
- TOP results by CONfident efFECT Sizes.☆15Dec 9, 2024Updated last year
- Bioinformatics course (WSBIM1322)☆17Jan 12, 2026Updated last month
- Script to automate differential expression analysis using DESeq2, edgeR or limma-voom☆20Aug 22, 2018Updated 7 years ago
- Scripts for data and figure generation in SAVER paper☆17Jan 5, 2021Updated 5 years ago
- Digital Expression Explorer 2 (DEE2): a repository of uniformly processed RNA-seq data☆40Dec 19, 2025Updated last month
- R package of techniques for comparing clusterings of single-cell sequencing data☆41Apr 26, 2024Updated last year
- Single-cell RNA-seq Gene Expression Recovery☆115Nov 28, 2024Updated last year
- Repository for the paper "The impact of package selection and versioning on single-cell RNA-seq analysis"☆21Nov 27, 2025Updated 2 months ago
- A Grammar of Data Manipulation for Omics Data☆21Aug 31, 2020Updated 5 years ago
- Mostly deprecated in favor of : https://github.com/hbc/bcbioRNASeq. Quality control, differential gene/transcript expression and pathway …☆24Dec 11, 2017Updated 8 years ago
- Identify cell barcodes from single-cell genomics sequencing experiments☆43Dec 14, 2021Updated 4 years ago
- Source code for integrative nonnegative matrix factorization☆19Jul 12, 2018Updated 7 years ago
- ATACseqQC tutorials for BioC 2019 workshop☆19Jul 28, 2020Updated 5 years ago
- MATCHER (Manifold Alignment to Characterize Experimental Relationships) is an approach for integrating single cell transcriptomic and epi…☆23Jun 16, 2017Updated 8 years ago