BaderLab / scClustVizLinks
Explore and share your scRNAseq clustering results
☆50Updated last year
Alternatives and similar repositories for scClustViz
Users that are interested in scClustViz are comparing it to the libraries listed below
Sorting:
- R package for specialised analysis of single cell data☆38Updated 2 years ago
- ☆55Updated 4 years ago
- Clone of the Bioconductor repository for the scran package.☆42Updated 10 months ago
- scDataviz: single cell dataviz and downstream analyses☆63Updated 3 years ago
- ☆41Updated 4 years ago
- Statistical approach for removing unwanted variation from multiple single-cell datasets☆67Updated last year
- Linear trajectory inference for single-cell RNA-seq☆59Updated last year
- A R framework for pipeline benchmarking, with application to single-cell RNAseq☆41Updated 3 years ago
- An R-based interface for loom files☆66Updated 5 years ago
- An r package that works as a wrapper to homologene☆46Updated last year
- ☆37Updated 8 years ago
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆39Updated 3 years ago
- CONICS: COpy-Number analysis In single-Cell RNA-Sequencing☆74Updated 2 years ago
- An R toolkit for estimation of cell composition from bulk expression data☆74Updated last month
- ☆41Updated last month
- Clone of the Bioconductor repository for the DropletUtils package.☆59Updated last week
- Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data☆37Updated 2 years ago
- A tool for unsupervised projection of single cell RNA-seq data☆96Updated 4 years ago
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆45Updated 2 years ago
- Toolkit for Single-Cell Velocity☆58Updated this week
- Finding surprising needles (=genes) in haystacks (=single cell transcriptome data).☆83Updated 10 months ago
- ☆49Updated 7 years ago
- Cell type pipes for R☆51Updated last year
- Tidy R query API for the harmonised and curated CELLxGENE single-cell atlas.☆92Updated 6 months ago
- ☆60Updated 4 years ago
- R package containing the Cerebro application.☆40Updated 3 years ago
- Identify and correct invalid gene symbols☆58Updated 7 months ago
- A tool for removing doublets from single-cell RNA-seq data☆74Updated 4 years ago
- Normalize CITEseq Data☆66Updated 3 months ago
- Cluster single cells and analyze cell clade relationships with colorful visualizations.☆45Updated 3 years ago