BaderLab / scClustViz
Explore and share your scRNAseq clustering results
☆48Updated last year
Alternatives and similar repositories for scClustViz:
Users that are interested in scClustViz are comparing it to the libraries listed below
- R package for specialised analysis of single cell data☆37Updated 2 years ago
- ☆38Updated 4 years ago
- scDataviz: single cell dataviz and downstream analyses☆63Updated 3 years ago
- ☆53Updated 4 years ago
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆35Updated 3 years ago
- ☆35Updated 11 months ago
- ☆37Updated 8 years ago
- CONICS: COpy-Number analysis In single-Cell RNA-Sequencing☆74Updated last year
- Identify and correct invalid gene symbols☆59Updated 3 months ago
- An r package that works as a wrapper to homologene☆42Updated last year
- Single Cell Epigenome-based Inference of Activity☆19Updated last year
- Linear trajectory inference for single-cell RNA-seq☆59Updated 10 months ago
- Clone of the Bioconductor repository for the scran package.☆41Updated 5 months ago
- A tool for removing doublets from single-cell RNA-seq data☆71Updated 4 years ago
- A tool for unsupervised projection of single cell RNA-seq data☆93Updated 4 years ago
- Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data☆36Updated 2 years ago
- ConsensusTME Gene Sets and R Script☆39Updated 8 months ago
- Clone of the Bioconductor repository for the DropletUtils package.☆56Updated 2 months ago
- supporting code for the multinomial single cell RNA-Seq paper☆51Updated 4 years ago
- scWGCNA☆56Updated 2 years ago
- Toolkit for Single-Cell Velocity☆54Updated last month
- SIB/Scilifelab autumn school in single cell omics 2019.☆22Updated 5 years ago
- R package for robust clustering of single cell RNA sequencing data☆38Updated last year
- ☆53Updated this week
- Normalize CITEseq Data☆65Updated 8 months ago
- Clone of the Bioconductor repository for the batchelor package.☆16Updated 7 months ago
- ☆46Updated 2 years ago
- cytofkit: an integrated flow/mass cytometry data analysis pipeline☆57Updated 4 years ago
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆44Updated last year
- Cell type pipes for R☆51Updated last year