☆14Jan 16, 2019Updated 7 years ago
Alternatives and similar repositories for svca
Users that are interested in svca are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆30Oct 4, 2024Updated last year
- Test genes for Spatial Variation☆15Dec 20, 2024Updated last year
- Tools to handle IMC data☆25Mar 31, 2022Updated 4 years ago
- End-to-end pipeline for segmenting cell nuclei on histology slides☆16Jul 19, 2022Updated 3 years ago
- PROGENY Python implementation☆12Apr 5, 2022Updated 4 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆17Mar 18, 2025Updated last year
- BayesTME: A reference-free Bayesian method for analyzing spatial transcriptomics data☆14Apr 29, 2025Updated last year
- Dorothea package in Python☆11Apr 5, 2022Updated 4 years ago
- Negative binomial regression for Spatial Transcriptomics data as described in Maaskola et al. 2018☆22Nov 2, 2018Updated 7 years ago
- Spatially resolved transcriptomic analysis☆66Nov 17, 2022Updated 3 years ago
- Python client for IONpath MIBItracker API, plus utility functions for working with MIBItiff images.☆14Oct 15, 2024Updated last year
- A user-friendly library that brings familiar DataFrame-style operations to AnnData objects with a simple and expressive API.☆17Apr 27, 2026Updated last week
- Tools and scripts for EASI-FISH image data analysis☆17Oct 19, 2022Updated 3 years ago
- ☆38Jan 21, 2026Updated 3 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Histology Topography Cytometry Analysis Toolbox☆69Mar 23, 2026Updated last month
- ☆12Aug 23, 2018Updated 7 years ago
- ☆14Aug 9, 2017Updated 8 years ago
- Variance stabilizing transformation for Gamma Poisson distributed data☆22Apr 11, 2023Updated 3 years ago
- A novel computational method for inferring cell-type-specific signaling networks using single-cell transcriptomics data for better charac…☆44Oct 10, 2025Updated 6 months ago
- A volume slicer for Dash☆25Mar 9, 2025Updated last year
- Nonnegative spatial factorization for multivariate count data☆66Jun 28, 2023Updated 2 years ago
- Quantitative proteomics workflow☆16Sep 30, 2022Updated 3 years ago
- Data-driven signal detection for unbiased scRNA-seq data analysis☆23Jan 22, 2026Updated 3 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆19Nov 24, 2024Updated last year
- Minimum Information about Tissue Imaging☆21Oct 18, 2023Updated 2 years ago
- Splotch is a hierarchical generative probabilistic model for analyzing Spatial Transcriptomics (ST) data☆21May 19, 2025Updated 11 months ago
- Single-cell analytic toolbox that offers modular workflows for multi-level cellular annotation and user-friendly analysis reports☆11Mar 31, 2026Updated last month
- Examples and code for optical pooled screens☆10Dec 8, 2022Updated 3 years ago
- tGPLVM: A Nonparametric, Generative Model for Manifold Learning with scRNA-seq experimental data☆17Jun 4, 2019Updated 6 years ago
- SPATA Package for spatial gene expression analysis☆21May 6, 2022Updated 4 years ago
- a simulator of long read sequencing in pacbio and oxford nanopore☆15Oct 13, 2016Updated 9 years ago
- ☆25Updated this week
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Multi-study integration of cellular trajectories☆19Jun 1, 2020Updated 5 years ago
- A simple native R reader for Zarr Arrays☆49Updated this week
- ☆53Apr 1, 2021Updated 5 years ago
- Scripts needed to generate the figures for the Monocle 2 paper (Qiu et al, 2017)☆29Jul 1, 2020Updated 5 years ago
- Tools for generating single-cell gene expression data☆34Jun 20, 2025Updated 10 months ago
- Code and results from TotalSeqC antibody titration and pipeline benchmarking for CITE-seq experiments☆10Mar 13, 2021Updated 5 years ago
- ☆11Dec 8, 2023Updated 2 years ago