krasnowlab / HLCALinks
☆60Updated 4 years ago
Alternatives and similar repositories for HLCA
Users that are interested in HLCA are comparing it to the libraries listed below
Sorting:
- ☆42Updated 3 months ago
- scWGCNA☆61Updated 2 years ago
- ☆63Updated 4 years ago
- R package for specialised analysis of single cell data☆39Updated 2 years ago
- Gene regulatory network containing signed transcription factor-target gene interactions☆87Updated 3 months ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆46Updated last year
- Cluster single cells and analyze cell clade relationships with colorful visualizations.☆45Updated 4 years ago
- Capybara: A computational tool to measure cell identity and fate transitions☆59Updated 3 years ago
- Coarse-graining of large single-cell RNA-seq data into metacells☆88Updated 2 months ago
- A tool for removing doublets from single-cell RNA-seq data☆74Updated 4 years ago
- ☆55Updated 4 years ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆38Updated 4 years ago
- Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data☆42Updated last year
- ☆58Updated last year
- Imputation method for scRNA-seq based on low-rank approximation☆77Updated last year
- Clone of the Bioconductor repository for the scran package.☆43Updated last year
- Finding surprising needles (=genes) in haystacks (=single cell transcriptome data).☆85Updated last year
- Pipeline for characterizing metebolic heterogeneity from single-cell RNA-seq data☆22Updated 3 years ago
- SIB/Scilifelab autumn school in single cell omics 2019.☆22Updated 5 years ago
- Gene signature extraction and cell-identity recognition at individual cell level from single-cell RNA-seq.☆95Updated last year
- Multi-omics profiling of peripheral immune system response to SARS-CoV-2 infection☆41Updated 3 years ago
- Single cell RNA-seq analysis bundle☆36Updated 6 years ago
- A R package for integrated scRNA-seq data analysis using the RPCI algorithm☆44Updated last year
- ☆50Updated 5 years ago
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆35Updated 4 years ago
- Pan-Cancer Single Cell Classifier☆78Updated last year
- Inference of cell-cell communication from single-cell RNAseq data☆48Updated 4 months ago
- R package for semi-supervised single-cell data integration☆88Updated last month
- ☆42Updated 4 years ago
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆31Updated last year