Argonum-Clever2 / mikeLinks
☆31Updated 4 months ago
Alternatives and similar repositories for mike
Users that are interested in mike are comparing it to the libraries listed below
Sorting:
- ☆40Updated 2 years ago
- A genome assembly assessment pipeline.☆37Updated last year
- wgd v2: a suite of tools to uncover and date ancient polyploidy and whole-genome duplication☆37Updated 5 months ago
- ☆21Updated last year
- use long sequenced reads to close gaps in assemblies☆37Updated 6 years ago
- Centromics: visualing centromeres with multiple omics data☆19Updated last year
- HELIANO is a software for detection and classification of Helitron-like elements.☆29Updated last month
- Toolkit for evolutionary analyses of linkage groups☆32Updated last year
- SyntenyFinder contains a collection of scripts for performing and visualizing macrosynteny analyses. It supports annotated chromosome-lev…☆31Updated 6 months ago
- Gapless provides combined scaffolding, gap-closing and assembly correction with long reads☆35Updated 2 years ago
- Dynamic Elongation of a Genome Assembly Path☆21Updated last year
- ☆41Updated 2 years ago
- ☆24Updated last year
- A python script for finding telomeric repeats (TTAGGG/CCCTAA) in FASTA files☆34Updated 3 years ago
- Automated pipeline for running CoalHMM☆13Updated last year
- Robust identification of orthologous Synteny with the Orthology Index☆25Updated 3 weeks ago
- ☆35Updated 2 weeks ago
- A quick user guide for de novo transposable element (TE) library generation and TE screening. Utilising; the Extensive de novo TE Annotat…☆27Updated 2 years ago
- Centromics: visualing centromeres with multiple omics data☆24Updated 5 months ago
- HiCAT new project☆28Updated 2 months ago
- ☆28Updated last year
- Genome Annotation Pipeline☆36Updated 11 months ago
- ☆30Updated 7 months ago
- Multi-genome synteny block visualization tool☆42Updated 6 months ago
- A personal pipeline to calculate Ka,Ks and Ka/Ks using PAML-yn00 with YN method☆9Updated 5 months ago
- Python script calculating transposable element density for all genes in a genome. Publication: https://mobilednajournal.biomedcentral.com…☆33Updated 10 months ago
- ☆27Updated 4 months ago
- Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates…☆35Updated last year
- Reconstruction of ancestral genome maps☆16Updated 7 years ago
- a Semi-automated pipeline for assembling T2T genome☆19Updated 2 months ago