Argonum-Clever2 / mikeLinks
☆32Updated 7 months ago
Alternatives and similar repositories for mike
Users that are interested in mike are comparing it to the libraries listed below
Sorting:
- A genome assembly assessment pipeline.☆37Updated last year
- wgd v2: a suite of tools to uncover and date ancient polyploidy and whole-genome duplication☆37Updated 8 months ago
- ☆40Updated 2 years ago
- Toolkit for evolutionary analyses of linkage groups☆32Updated last year
- A python script for finding telomeric repeats (TTAGGG/CCCTAA) in FASTA files☆34Updated 3 years ago
- HiCAT new project☆29Updated 5 months ago
- A personal pipeline to calculate Ka,Ks and Ka/Ks using PAML-yn00 with YN method☆10Updated 8 months ago
- Centromics: visualing centromeres with multiple omics data☆20Updated last year
- ☆21Updated last year
- ☆24Updated last year
- Draw a dot plot from a paf alignment☆34Updated last month
- HELIANO is a software for detection and classification of Helitron-like elements.☆31Updated 4 months ago
- a Semi-automated pipeline for assembling T2T genome☆24Updated last week
- Gapless provides combined scaffolding, gap-closing and assembly correction with long reads☆38Updated 2 years ago
- Dynamic Elongation of a Genome Assembly Path☆22Updated last year
- Multi-genome synteny block visualization tool☆47Updated last week
- A quick user guide for de novo transposable element (TE) library generation and TE screening. Utilising; the Extensive de novo TE Annotat…☆27Updated 2 years ago
- An Example of Subgenome Phasing for Complex Allopolyploidy☆13Updated 5 months ago
- This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…☆32Updated 9 months ago
- ☆28Updated 6 months ago
- use long sequenced reads to close gaps in assemblies☆39Updated 7 years ago
- Reconstruction of ancestral genome maps☆16Updated 7 years ago
- SyntenyFinder contains a collection of scripts for performing and visualizing macrosynteny analyses. It supports annotated chromosome-lev…☆33Updated 9 months ago
- Robust identification of orthologous Synteny with the Orthology Index☆32Updated last month
- Genome Annotation Pipeline☆39Updated last year
- Centromics: visualing centromeres with multiple omics data☆24Updated 7 months ago
- ☆25Updated 3 years ago
- reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph☆17Updated 2 years ago
- ☆45Updated 2 years ago
- This is a method to find telomeres and centromeres in plants.☆42Updated 2 years ago