Deep Learning Framework for Transposable Element Discovery and Annotation
☆12Aug 18, 2026Updated 2 months ago
Alternatives and similar repositories for PanTEon
Users that are interested in PanTEon are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Tools for Gene Expression Quantification in Polyploid Species☆14Sep 29, 2025Updated last year
- PhaseGrass, a reference-based phasing workflow generating chromosome-level haplotype-resolved diploid assembly for highly heterozygous ge…☆18Jun 2, 2026Updated 5 months ago
- This is a modified version of EDTA -- zgtools☆20Nov 5, 2026Updated last week
- Polyploid allele identification☆12Jul 8, 2025Updated last year
- ☆27Oct 22, 2026Updated 3 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Dynamic Elongation of a Genome Assembly Path☆32Oct 26, 2026Updated 2 weeks ago
- ☆29May 12, 2026Updated 6 months ago
- PlantGeneAnn: Plant Gene Annotator☆16Oct 19, 2026Updated 3 weeks ago
- ☆25Feb 26, 2026Updated 8 months ago
- ☆27Jun 27, 2026Updated 4 months ago
- a Semi-automated pipeline for assembling T2T genome☆30Oct 16, 2025Updated last year
- A Comparative Genomics Framework Integrating Synteny Visualization☆20May 6, 2026Updated 6 months ago
- Codes for pear haplotype genome and pangenome graph construction☆13Jun 22, 2026Updated 4 months ago
- A pipeline for extracting Presence-Absence Variations (PAVs) in eukaryotic and prokaryotic genomes across multiple assemblies.☆11May 21, 2026Updated 5 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- a gap-filling tools of genome in complex region.☆28Dec 30, 2025Updated 10 months ago
- A chromosome-level polyploid phasing scaffolding tool☆29Oct 19, 2026Updated 3 weeks ago
- Telomere compliment tools☆28Nov 17, 2025Updated 11 months ago
- ☆34Apr 7, 2025Updated last year
- AlleleFinder is a tool for identifying allele genes from polyploid genome.☆40May 29, 2026Updated 5 months ago
- reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph☆23Jul 26, 2023Updated 3 years ago
- zgtools: A pipeline that allows for the convenient acquisition of T2T (Telomere-to-Telomere) genomes.☆33Nov 7, 2026Updated last week
- Eukaryote Genome Annotation☆31Oct 14, 2026Updated last month
- Annotation Extraction Genomic Integration Suite (AEGIS) is a powerful and flexible Python-based suite for the manipulation, analysis, and…☆16Updated this week
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- QuickProt: A Fast and Accurate Homology-Based Protein Annotation Tool for Non-Model Organisms to Advance Comparative Genomics☆25Sep 25, 2026Updated last month
- Paludamentum is the coat of the emperor - evidence processing pipeline☆13Updated this week
- ☆33Oct 21, 2026Updated 3 weeks ago
- Repository for scripts used in barley pan-genome graph construction with Minigraph☆15Oct 15, 2025Updated last year
- Domain based annotation of transposable elements☆25Jul 21, 2026Updated 3 months ago
- Robust identification of orthologous Synteny with the Orthology Index☆44Oct 31, 2026Updated 2 weeks ago
- Construct and Analyze the North American Vitis pangenome☆29Aug 19, 2025Updated last year
- ☆21Jul 12, 2026Updated 4 months ago
- An integrative pipeline for family-level super-pangenome analysis across coding and noncoding sequences.☆26Apr 13, 2026Updated 7 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- An R package to perform systematic quality checks on comparative genomics analyses☆12Mar 5, 2026Updated 8 months ago
- A program for assessing the T2T genome continuity and completeness☆100Nov 2, 2026Updated last week
- ☆17Feb 2, 2026Updated 9 months ago
- tandemtwister: Tandem repeat genotyping tool☆23Feb 1, 2026Updated 9 months ago
- Inpactor2: LTR retrotransposon detector and classificator using Deep Learning☆30Jun 17, 2025Updated last year
- A fast, robust and accurate variant calling software for human germline DNA analysis☆15Jun 30, 2026Updated 4 months ago
- A Tool for low Coverage HiFi Data Assembly☆44Dec 27, 2025Updated 10 months ago
Are these results useful?