sunnyeesl / BigLDLinks
☆21Updated 3 years ago
Alternatives and similar repositories for BigLD
Users that are interested in BigLD are comparing it to the libraries listed below
Sorting:
- A flexible tool for the multi-resolution localization of causal variants across the genome, accounting for population structure.☆15Updated 3 years ago
- Population-based detection of structural variation from High-Throughput Sequencing.☆31Updated 2 years ago
- Interactive eQTL visualizations☆13Updated 2 years ago
- Sweep Inference Framework (controlling for correlation)☆29Updated last year
- Fast and scalable variant annotation tool☆30Updated 3 years ago
- Transposon Insertion Finder - Detection of new TE insertions in NGS data☆20Updated last month
- a Shiny/R application to view and annotate copy number variations☆28Updated 2 years ago
- Population-wide Deletion Calling☆35Updated 3 months ago
- A set of tools to annotate VCF files with expression and readcount data☆29Updated 4 months ago
- Telomerecat: The telomere computational analysis tool☆21Updated 3 years ago
- Bedfile perturbation tool☆17Updated last year
- Unfazed by genomic variant phasing☆27Updated last year
- Structural variant (SV) analysis tools☆36Updated last year
- Reducing reference bias using multiple population reference genomes☆32Updated last year
- Two pass alignment for long reads☆22Updated 4 years ago
- novoBreak: local assembly for breakpoint detection in cancer genomes☆26Updated 7 years ago
- A small repo for storing the code for making the files and html for CCRs.☆22Updated 5 years ago
- Teaching modules for Human Genome Variation Lab.☆20Updated last month
- BreakSeq2: Ultrafast and accurate nucleotide-resolution analysis of structural variants☆24Updated 9 years ago
- R API for browsing, analyzing, and manipulating reference-aligned genome graphs in a GenomicRanges framework☆40Updated last month
- Functions to compare a SV call sets against a truth set.☆30Updated 3 weeks ago
- ☆25Updated 3 weeks ago
- QUILT: Low coverage whole genome sequence imputation with large reference panels☆64Updated this week
- seqcover allows users to view coverage for hundreds of genes and dozens of samples☆52Updated 4 years ago
- R-package: Calculation of haplotype blocks and libraries☆31Updated 4 months ago
- Flexible Bayesian inference of mutational signatures☆35Updated 2 years ago
- Simultaneous detection of SNPs and Indels using a 16-genotype probabilistic model☆27Updated last year
- PopSTR - A Population based microsatellite genotyper☆33Updated last year
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Updated 3 months ago
- A command line tool to compute mapping statistics from a BAM file☆24Updated 3 years ago