elsiklab / multibigwigLinks
A JBrowse plugin for plotting multiple bigwig subtracks
☆12Updated 3 years ago
Alternatives and similar repositories for multibigwig
Users that are interested in multibigwig are comparing it to the libraries listed below
Sorting:
- Multi-sample genome coverage viewer to observe large, coverage-based anomalies alongside annotations and sample metadata☆58Updated 3 years ago
- Adapter trimming and virtual library creation for Illumina Nextera Mate Pair libraries.☆53Updated 7 years ago
- Blast2Bam uses the XML results of Blastn, the reference and the fastQ or fasta file(s) to output a SAM file.☆50Updated 4 years ago
- a pileup library that embraces the huge☆43Updated 5 years ago
- Exact Tandem Repeat Finder (not a TRF replacement)☆51Updated 6 years ago
- Tools and software library developed by the ONT Applications group☆64Updated 4 years ago
- My experimental tools on top of htslib. NOT OFFICIAL!!!☆58Updated 3 months ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆36Updated 6 years ago
- Error correction for Oxford Nanopore data☆47Updated 4 years ago
- What is true, thank you, ernestly. A large variant benchmarking tool analogous to hap.py for small variants.☆36Updated 2 years ago
- Analysis tool for Nanopore sequencing data☆34Updated 6 years ago
- 10x Genomics Reads Simulator☆46Updated 2 years ago
- Prioritize structural variants based on CADD scores☆29Updated 5 years ago
- k-mer counting software☆39Updated 3 years ago
- UCSC Nanopore☆44Updated 6 years ago
- Some simple scripts to ease management and local basecalling of millions of FAST5 files☆25Updated 8 years ago
- A tool to reduce the size of Oxford Nanopore Technologies' datasets without losing information☆30Updated 2 years ago
- More realistic simulator for genomic DNA sequences from Illumina machines that achieves a similar k-mer spectrum as the original☆51Updated 3 years ago
- Various scripts and recipes for working with nanopore data☆34Updated 9 years ago
- Reference-free variant discovery in large eukaryotic genomes☆41Updated 4 years ago
- adds sample names and read-group (RG) tags to BAM alignments☆51Updated 5 years ago
- REINDEER REad Index for abuNDancE quERy☆56Updated 6 months ago
- ⛰ covtobed | Convert the coverage track from a BAM file into a BED file☆44Updated 2 months ago
- de Bruijn Graph-based read aligner☆35Updated 7 years ago
- Making diploid assembly becomes common practice for genomic study☆30Updated 8 years ago
- program for haplotype phasing from sequence reads and related tools☆25Updated 7 years ago
- Miscellaneous Bioinformatics scripts etc mostly in Python☆45Updated this week
- Exploration of controlled loss of quality values for compressing CRAM files☆36Updated 2 years ago
- a long-read error correction tool using the multi-string Burrows Wheeler Transform☆45Updated 5 years ago
- Structural Variant Index☆75Updated last year