tpook92 / HaploBlockerLinks
R-package: Calculation of haplotype blocks and libraries
☆35Updated 5 months ago
Alternatives and similar repositories for HaploBlocker
Users that are interested in HaploBlocker are comparing it to the libraries listed below
Sorting:
- ☆26Updated 10 months ago
- Compute N50/NG50 and auN/auNG☆33Updated 2 years ago
- Framework for analyzing low depth NGS data in heterogeneous populations using PCA.☆56Updated 6 months ago
- TELR is a fast non-reference transposable element detector from long read sequencing data.☆35Updated 2 years ago
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆43Updated 6 years ago
- ☆35Updated 5 years ago
- calling SVs from Blasr contig level alignments☆54Updated 7 years ago
- Likelihood-based Selective Sweep Detection☆40Updated 2 years ago
- ☆25Updated last year
- Haplotype and population structure inference using neural networks.☆27Updated last year
- ☆44Updated last year
- Tools and Utilities for msmc and msmc2☆49Updated 4 months ago
- Transposable element polymorphism identification☆34Updated 5 years ago
- Software for ancestry estimation in unrelated individuals☆22Updated 3 weeks ago
- Code for phasing SVs with SNPs☆52Updated 5 years ago
- A tool for discovering transposable elements and describing patterns of genome evolution☆31Updated 2 years ago
- ☆31Updated 6 years ago
- A tool for recovering synteny blocks from multiple alignment☆32Updated 4 years ago
- Tool for assessing/improving assembly quality in extra-long tandem repeats☆47Updated 4 years ago
- Infer demographic history with the Moran model☆50Updated 6 months ago
- A repo contains historical and updated MTEC libraries.☆18Updated 5 years ago
- R package to draw syntenic plots in 3 different styles☆42Updated 4 months ago
- Genealogical Estimation of Variant Age (GEVA)☆32Updated 4 years ago
- ☆29Updated last year
- Population genetics analyses from NGS data☆25Updated 4 years ago
- methods for orphan gene prediction paper optimization☆25Updated 4 years ago
- Transfer coordinates across genomes☆23Updated 7 months ago
- A Nextflow workflow to generate lift over files for any pair of genomes☆69Updated last month
- scripts for sequence and feature conversion, annotation, analysis ...☆28Updated 9 months ago
- Upscaling SV detection to a multi-population level.☆22Updated 5 months ago