shanwai1234 / GPWASLinks
Genome-Phenome Wide Association Study
☆15Updated 2 years ago
Alternatives and similar repositories for GPWAS
Users that are interested in GPWAS are comparing it to the libraries listed below
Sorting:
- ☆16Updated 10 months ago
- R-package: Calculation of haplotype blocks and libraries☆33Updated last month
- Methods and recipes for Plant Genome Annotation - Transposable Elements☆20Updated 2 months ago
- Build haplotye and generate figures☆18Updated 3 years ago
- Genome-wide scan for balancing selection using beta statistic☆29Updated 2 years ago
- A long-read SV calling pipeline☆12Updated 4 years ago
- Script to help assessing the evolutionary history of a TE family☆16Updated 5 years ago
- A pipeline to use Lep-Map3 to create linkage maps and LepAnchor for anchoring and orienting genome assemblies with said linkage maps.☆13Updated 2 months ago
- ☆14Updated 6 years ago
- Main scripts and commands used to analyze goat population genetic and domestication☆20Updated 6 years ago
- ☆22Updated 6 years ago
- ☆15Updated 5 years ago
- A haplotype analysis toolkit for natural variation study.☆30Updated last year
- The R tool associated with 3VmrMLM, a comprehensive GWAS method for identifying QTNs, QTN-by-environment interactions, and QTN-by-QTN int…☆33Updated 2 months ago
- The GitHub repository for the A. thaliana pan-NLR'ome project.☆18Updated 6 years ago
- Split-read pipeline for the identification of non-reference TE insertions with TSDs☆25Updated 4 years ago
- conserved non-coding sequence☆14Updated 3 years ago
- issues for semina "Data Visulization"☆13Updated 2 months ago
- repository for code used in analysis of open wild wheat consortium☆16Updated 3 years ago
- ☆31Updated 5 years ago
- B73Ab10 genome assembly methods☆16Updated 3 years ago
- RRSelection: A linkage disequilibrium method to detect selection region across population VCF☆14Updated 6 years ago
- Construct and Analyze the North American Vitis pangenome☆24Updated 2 weeks ago
- The IntroBlocker ancestry inference algorithm☆15Updated last year
- A Plant Presence/absence Variants Scanner and Pan-genome Construction Pipeline☆27Updated 4 years ago
- scripts for the project of seven thaliana genomes assembly☆41Updated 4 years ago
- Integrate multiple genome assemblies into a pangenome graph☆35Updated 3 years ago
- ☆27Updated 2 years ago
- my commonly used perl script☆19Updated 5 years ago
- ☆15Updated 5 years ago