ngs-docs / 2015-shell-genomicsLinks
Lesson for the shell for genomics
☆10Updated 4 years ago
Alternatives and similar repositories for 2015-shell-genomics
Users that are interested in 2015-shell-genomics are comparing it to the libraries listed below
Sorting:
- Machine learning use cases for teaching☆13Updated 7 years ago
- RNA-seq quantifications: gene expression responses to human rhinovirus infection for 6 asthmatic and 6 non-asthmatic donors (SRP046226)☆19Updated 7 years ago
- ☆18Updated 9 years ago
- CLI to automate Nextflow pipeline testing☆12Updated 3 months ago
- Scripts for reproducing analyses of large RNA-seq datasets☆15Updated 6 years ago
- Interactive table from gemini output☆10Updated 6 years ago
- Allele frequency filter app☆14Updated 3 years ago
- Allele-Specific Quantification of Structural Variations in Cancer Genomes☆17Updated 6 years ago
- ☆11Updated 6 years ago
- ☆10Updated 9 years ago
- R Interface to the NCBI SRA metadata☆23Updated 6 years ago
- iAnnotateSV is a Python library and command-line software toolkit to annotate and visualize structural variants detected from Next Genera…☆16Updated last month
- materials and website for the 2016 kallisto sleuth workshop☆11Updated 8 years ago
- Artisanal 🤣 bioinformatics tools and pipelines in Scala☆20Updated 5 years ago
- Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities☆25Updated 5 years ago
- ☆12Updated last month
- An analysis of Arabidopsis RNA-seq data (hy5 mutant and wt, two replicates each; SRA accession SRX029582)☆16Updated 12 years ago
- ☆11Updated 2 years ago
- A tool to examine duplicate read characteristics in a BAM file☆12Updated 7 years ago
- Improved multi-sample transcript abundance estimates using adaptive priors☆20Updated 6 years ago
- R package to quickly obtain count vectors from indexed bam files☆15Updated 3 years ago
- Color DNA/RNA bases in terminal output☆21Updated 7 years ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated last year
- HGNC Comparison of Orthology Predictions (HCOP)☆14Updated 7 years ago
- ☆18Updated 8 years ago
- Expectation-Maximization algorithm for Allele-Specific Expression☆21Updated 2 years ago
- A tool set to assess the quality of the per read phasing and reduce the errors.☆12Updated 4 years ago
- R htmlwidget package for ideogram.js☆16Updated 2 years ago
- Toolkit for calling and analyzing de novo STR mutations☆13Updated last year
- Genomic plot in trellis layout☆40Updated last year