evodify / allele-specific-expressionLinks
Pipeline to perform the allele-specific expression analysis (based on the work by Skelly et al. 2011)
☆12Updated 5 months ago
Alternatives and similar repositories for allele-specific-expression
Users that are interested in allele-specific-expression are comparing it to the libraries listed below
Sorting:
- Perform GWAS with gemma in a simple pipeline☆27Updated 6 months ago
- Population genetics analyses from NGS data☆25Updated 4 years ago
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆42Updated 6 years ago
- ☆22Updated 6 years ago
- Transposable element polymorphism identification☆34Updated 5 years ago
- Tutorial on using popular tools for learning about population history☆52Updated 7 years ago
- ☆24Updated 8 years ago
- A repo contains historical and updated MTEC libraries.☆18Updated 5 years ago
- scripts for the project of seven thaliana genomes assembly☆42Updated 4 years ago
- Utilities for analyzing next generation sequencing data☆17Updated 7 years ago
- Pipeline for structural variation detection in cohorts☆52Updated 4 years ago
- Genome-wide scan for balancing selection using beta statistic☆29Updated 2 years ago
- Project description and analytic scripts for cis/trans regulation of fiber development in G. hirsutum☆17Updated last year
- ☆17Updated 3 years ago
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Updated 7 months ago
- ☆17Updated 9 years ago
- Bulked-Segregant Analysis using vcf file with or without parents☆31Updated 11 months ago
- Working on cotton resequencing☆11Updated 5 years ago
- A box of genomics tools☆21Updated 5 years ago
- ☆31Updated 5 years ago
- R package for comparing mixture solutions to similarity data, with a focus STRUCTURE like models to ChromoPainter palettes☆27Updated 6 years ago
- Efficient program for calculating Extended Haplotype Homozygosity (EHH) and Integrated Haplotype Score (iHS)☆45Updated 6 years ago
- ☆42Updated last year
- TELR is a fast non-reference transposable element detector from long read sequencing data.☆35Updated 2 years ago
- ☆24Updated 2 years ago
- ☆11Updated 5 years ago
- Split-read pipeline for the identification of non-reference TE insertions with TSDs☆25Updated 5 years ago
- Tools and Utilities for msmc and msmc2☆49Updated 3 months ago
- Framework for analyzing low depth NGS data in heterogeneous populations using PCA.☆55Updated 4 months ago
- A haplotype analysis toolkit for natural variation study.☆30Updated 2 years ago