evodify / allele-specific-expressionLinks
Pipeline to perform the allele-specific expression analysis (based on the work by Skelly et al. 2011)
☆11Updated last month
Alternatives and similar repositories for allele-specific-expression
Users that are interested in allele-specific-expression are comparing it to the libraries listed below
Sorting:
- Perform GWAS with gemma in a simple pipeline☆26Updated 2 months ago
- Project description and analytic scripts for cis/trans regulation of fiber development in G. hirsutum☆16Updated last year
- Genome-wide scan for balancing selection using beta statistic☆29Updated 2 years ago
- Split-read pipeline for the identification of non-reference TE insertions with TSDs☆25Updated 4 years ago
- Pipelines and scripts for analysing RNA-seq,genome and other sequecing data.☆9Updated 5 years ago
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Updated 2 months ago
- Make Pseudo-Reference Genome from VCF/BCF☆14Updated 4 years ago
- Code and Tutorials for Running the MArginal ePIstasis Test (MAPIT)☆15Updated 2 years ago
- R package for comparing mixture solutions to similarity data, with a focus STRUCTURE like models to ChromoPainter palettes☆25Updated 5 years ago
- QTL mapping with binmap data☆18Updated 6 years ago
- Main scripts and commands used to analyze goat population genetic and domestication☆20Updated 6 years ago
- ☆24Updated 8 years ago
- Transposable element polymorphism identification☆33Updated 4 years ago
- The GitHub repository for the A. thaliana pan-NLR'ome project.☆17Updated 6 years ago
- Killifish genomics scripts☆12Updated 4 years ago
- scripts for the project of seven thaliana genomes assembly☆39Updated 4 years ago
- A haplotype analysis toolkit for natural variation study.☆30Updated last year
- ☆22Updated 6 years ago
- The repository for codes developed to generated the Maize NC358 assemblies and analyses.☆10Updated 5 years ago
- A repo contains historical and updated MTEC libraries.☆18Updated 5 years ago
- ☆11Updated 2 years ago
- Pipeline to phase a genome into two homeologous subgenomes. Parental genomes are required.☆9Updated last month
- ☆17Updated 9 years ago
- Set of scripts to manupulate tab-delimited genotype calls files as well as to convert calls-files to other popular formats.☆10Updated 4 years ago
- ☆30Updated 5 years ago
- Scripts for NGS processing☆17Updated 7 years ago
- ☆25Updated 2 years ago
- ☆10Updated 5 years ago
- A pipeline for scaffolding a genome assembly using Hi-C☆13Updated 2 years ago
- Haplotype and population structure inference using neural networks.☆27Updated 6 months ago