Detection of incorrectly labeled sequences across kingdoms
☆88Oct 25, 2022Updated 4 years ago
Alternatives and similar repositories for conterminator
Users that are interested in conterminator are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- sensitive and precise assembly of short sequencing reads☆171Oct 11, 2024Updated 2 years ago
- ☆44Nov 20, 2021Updated 4 years ago
- MetaEuk - sensitive, high-throughput gene discovery and annotation for large-scale eukaryotic metagenomics☆213Sep 22, 2026Updated last month
- Compute a pairwise SNP distance matrix from one or two alignment(s)☆27Sep 12, 2024Updated 2 years ago
- SpacePHARER CRISPR Spacer Phage-Host pAiRs findER☆48May 8, 2024Updated 2 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Long-read metagenomic analysis☆113Oct 10, 2023Updated 3 years ago
- Pan-genome inference and genotyping with long noisy or short accurate reads☆121Dec 13, 2024Updated last year
- 🌈 Interactive analysis of metagenomics data☆456Sep 17, 2025Updated last year
- Mapping NCBI Genbank accession to GTDB accession☆14Feb 13, 2021Updated 5 years ago
- ProphAsm – a rapid computation of simplitigs directly from k-mer sets☆25Feb 17, 2023Updated 3 years ago
- 🐙 KrakenUniq: Metagenomics classifier with unique k-mer counting for more specific results☆249Jan 18, 2024Updated 2 years ago
- Align proteins to genomes with splicing and frameshift☆425Jan 5, 2026Updated 9 months ago
- Fast and accurate genomic distances using HyperLogLog☆162Jan 19, 2023Updated 3 years ago
- Histosketching Using Little Kmers☆56May 25, 2023Updated 3 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Fast and memory-efficient tool for large-scale k-mer analyses (indexing, querying, comparison): 16 million viral contigs analyzed in less…☆102Sep 10, 2026Updated last month
- SeqOthello supports fast coverage query and containment query.☆12May 8, 2019Updated 7 years ago
- ☆12Feb 14, 2023Updated 3 years ago
- Helper Perl scripts and tree files associated with the EukProt database of genome-scale eukaryotic protein sequence data sets.☆14Nov 30, 2023Updated 2 years ago
- MMseqs2: ultra fast and sensitive search and clustering suite☆2,165Updated this week
- De novo assembly of nanopore reads using nextflow☆20Aug 5, 2020Updated 6 years ago
- Microbial RNA annotation☆320Apr 12, 2026Updated 6 months ago
- A high-resolution long-read metagenome assembler for even noisy reads. Myloasm assembles strain-resolved, circular + complete genomes fro…☆176Oct 11, 2026Updated 3 weeks ago
- Gene cluster comparison figure generator☆660Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Convert GFF, fastas, annotation table and species name into Genbank.☆17Jan 14, 2026Updated 9 months ago
- ⚡♠️ Assemble bacterial isolate genomes from Illumina paired-end reads☆271Jun 11, 2026Updated 4 months ago
- De novo Extraction of Strains from MetAgeNomes☆72Jun 17, 2020Updated 6 years ago
- A minimal copy fastq and fasta reader built for parallel support and paired end processing☆51Oct 22, 2026Updated last week
- Script to collect sequence files from multiple NCBI WGS projects and process them (LEGACY SOFTWARE)☆10Apr 11, 2020Updated 6 years ago
- Ococo: the first online variant and consensus caller. Call genomic consensus directly from an unsorted SAM/BAM stream.☆46Jan 18, 2019Updated 7 years ago
- BigWig and BAM utilities☆105Sep 19, 2026Updated last month
- Quickly search, compare, and analyze genomic and metagenomic data sets.☆559Updated this week
- Bacterial Annotation by Learned Representation of Genes☆62Mar 26, 2026Updated 7 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A simple toolset for BED files (warning: CLI may change before bedtk becomes stable)☆147Aug 24, 2025Updated last year
- A high efficiency binary format for sequencing data☆110Aug 26, 2026Updated 2 months ago
- Bonsai: Fast, flexible taxonomic analysis and classification☆69Oct 23, 2026Updated last week
- sunburst plots for taxonomy - working to update Krona☆48Sep 22, 2025Updated last year
- Quickly calculate and visualize sequence coverage in alignment files☆102Jun 22, 2019Updated 7 years ago
- Get microbial sequence data easier and faster☆29Nov 7, 2019Updated 6 years ago
- Calculate genome wide average nucleotide identity (gwANI) for a multiFASTA alignment☆16Dec 5, 2018Updated 7 years ago