salzberg-lab / Balrog

Related projects ⓘ

Alternatives and complementary repositories for Balrog

• steineggerlab / conterminator
  Detection of incorrectly labeled sequences across kingdoms
  ☆80Updated 2 years ago
• Kalan-Lab / lsaBGC
  lsaBGC - Lineage Specific Analysis of Biosynthetic Gene Clusters
  ☆37Updated 3 months ago
• cjneely10 / MetaSanity
  Pipeline for major biological analyses.
  ☆34Updated 2 years ago
• kelwyres / Bactabolize
  ☆35Updated 2 weeks ago
• BeatsonLab-MicrobialGenomics / micropipe
  A pipeline for high-quality bacterial genome construction using ONT sequencing
  ☆38Updated 2 years ago
• davidemms / SHOOT
  SHOOT.bio - the phylogenetic search engine
  ☆24Updated last year
• guyleonard / get_jgi_genomes
  A quick and easy way to download the genomes/predicted proteins of taxa available in JGI's Genome Portal.
  ☆30Updated 2 months ago
• PedroMTQ / mantis
  A package to annotate protein sequences
  ☆53Updated 4 months ago
• Finn-Lab / SanntiS
  SMBGC Annotation using Neural Networks Trained on Interpro Signatures
  ☆21Updated 7 months ago
• drboothtj / getphylo
  a python package for automated generation of phylogenetic trees from genbank files
  ☆16Updated 2 weeks ago
• CCB-SB / plsdb
  PLSDB pipeline to collect bacterial plasmids from NCBI
  ☆36Updated 3 weeks ago
• zreitz / multismash
  A workflow and scripts for large-scale antiSMASH analyses
  ☆30Updated 2 weeks ago
• ToniWestbrook / paladin
  Protein Alignment and Detection Interface
  ☆61Updated 7 months ago
• BolognaBiocomp / deepsig
  DeepSig - Predictor of signal peptides in proteins based on deep learning
  ☆25Updated last year
• nselem / corason
  Bioinformatic Tools for study Evolution of metabolic diversity
  ☆30Updated 8 months ago
• ku-cbd / PhageBoost
  Rapid discovery of novel prophages using biological feature engineering and machine learning
  ☆35Updated 2 years ago
• deprekate / PHANOTATE
  PHANOTATE: a tool to annotate phage genomes.
  ☆69Updated last month
• Kalan-Lab / zol
  zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)
  ☆49Updated this week
• leylabmpi / Struo2
  Scalable creating/updating of metagenome profiling databases
  ☆58Updated last year
• adamhockenberry / bacphlip
  A python library for predicting phage lifestyle based on genome sequence
  ☆35Updated last year
• functional-dark-side / agnostos-wf
  ☆43Updated last year
• linsalrob / genbank_to
  Convert genbank files to a swath of other formats
  ☆14Updated last year
• evolbioinfo / booster
  ☆27Updated 4 years ago
• Gaius-Augustus / learnMSA
  Learning and Aligning Large Protein Families (MSA-HMM)
  ☆19Updated this week
• BackofenLab / CRISPRidentify
  ☆25Updated last week
• ZhaoXM-Lab / metaMIC
  Assessing and Improving the quality of metagenomic assemblies
  ☆27Updated 2 years ago
• TravisWheelerLab / nail
  Nail is an Alignment Inference tooL
  ☆41Updated this week
• moshi4 / phyTreeViz
  Simple phylogenetic tree visualization python package for phylogenetic analysis
  ☆42Updated 2 months ago
• takaram / kofam_scan
  CLI tool to annotate genes with KOfam
  ☆72Updated last year