nluhmann / BlastFrostLinks
☆44Updated 3 years ago
Alternatives and similar repositories for BlastFrost
Users that are interested in BlastFrost are comparing it to the libraries listed below
Sorting:
- Correcting errors in noisy long reads using variation graphs☆51Updated 2 years ago
- Fast and scalable nanopore adaptive sampling☆34Updated 2 years ago
- REINDEER REad Index for abuNDancE quERy☆56Updated 3 months ago
- URMAP ultra-fast read mapper☆38Updated 5 years ago
- ☆30Updated 2 years ago
- Genomic neighbor typing of bacterial pathogens using MinHash☆43Updated 2 years ago
- In-depth characterization and annotation of differences between two sets of DNA sequences☆62Updated 5 years ago
- fast, multithreaded sourmash operations: search, compare, and gather.☆23Updated last week
- ☆45Updated 2 months ago
- Fast and space-efficient taxonomic classification of long reads☆43Updated last month
- Automated strain separation of low-complexity metagenomes☆50Updated 3 years ago
- Haplotype-aware genome assembly toolkit☆29Updated 5 years ago
- Pan-Genomic Matching Statistics☆53Updated last year
- Output FASTQ summary statistics in JSON format☆29Updated 2 years ago
- kASA - k-Mer Analysis of Sequences based on Amino acid-like encoding☆23Updated 2 years ago
- base-accurate DNA sequence alignments using edlib and mashmap2☆32Updated 4 years ago
- A method of assessing sequence complexity based on kmer frequencies☆32Updated 7 years ago
- Strain-level haplotyping for metagenomes with short or long-reads.☆55Updated 5 months ago
- MegaPath-Nano: Accurate Compositional Analysis and Drug-level Antimicrobial Resistance Detection Software for Oxford Nanopore Long-read M…☆14Updated 3 years ago
- Code to create a PRG from a Multiple Sequence Alignment file☆25Updated 3 weeks ago
- Software that separates very close sequences that have been collapsed during assembly. Uses only long reads.☆35Updated 5 months ago
- Find Unique genomic Regions