PeptoneLtd / proteinmpnn_ddgLinks
Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
☆54Updated 4 months ago
Alternatives and similar repositories for proteinmpnn_ddg
Users that are interested in proteinmpnn_ddg are comparing it to the libraries listed below
Sorting:
- ☆71Updated 6 months ago
- Code for humanization of antibody and nanobody☆57Updated last month
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆39Updated last year
- Updated Protpardelle models with more robust motif scaffolding and multichain support☆38Updated this week
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆60Updated last year
- The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…☆86Updated 4 months ago
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆45Updated 10 months ago
- A benchmark for 3D biomolecular structure prediction models☆66Updated 5 months ago
- ☆35Updated 2 years ago
- Modelling protein conformational landscape with Alphafold☆53Updated last month
- ☆44Updated last year
- code for SeqDance/ESMDance, biophysics-informed protein language models☆40Updated 6 months ago
- ☆61Updated last year
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆33Updated 11 months ago
- Extension of ThermoMPNN for double mutant predictions☆43Updated 2 months ago
- Boltzmann-ranked alternative protein conformations from reduced-MSA AlphaFold2☆58Updated 2 months ago
- ☆28Updated 9 months ago
- protein structure generation with sparse all-atom denoising models☆40Updated 2 weeks ago
- ☆36Updated 6 months ago
- A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation☆74Updated 2 months ago
- Structure prediction of alternative protein conformations☆79Updated 7 months ago
- ☆41Updated 2 months ago
- ☆36Updated last year
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆32Updated 2 years ago
- Making Protein folding accessible to all!☆24Updated last year
- ☆88Updated 2 months ago
- ☆39Updated last year
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆66Updated 3 months ago
- code for IDR binding paper 2025☆56Updated 7 months ago
- ☆72Updated 4 months ago