Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
☆62May 21, 2025Updated 9 months ago
Alternatives and similar repositories for proteinmpnn_ddg
Users that are interested in proteinmpnn_ddg are comparing it to the libraries listed below
Sorting:
- Code for deep learning guided design of dynamic proteins☆32Jul 16, 2024Updated last year
- Sidechain conditioning and modeling for full-atom protein sequence design☆137Nov 11, 2025Updated 3 months ago
- ☆74Feb 13, 2026Updated 3 weeks ago
- ☆146Jul 16, 2025Updated 7 months ago
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆72Feb 21, 2026Updated 2 weeks ago
- Structure prediction of alternative protein conformations☆82Feb 24, 2025Updated last year
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆73Jul 2, 2025Updated 8 months ago
- 🧬 Fusion of protein sequence and structural information, using denoising pre-training network for zero-shot protein engineering (eLife 2…☆82May 16, 2025Updated 9 months ago
- Protein-ligand structure prediction☆239Jul 31, 2025Updated 7 months ago
- Making Protein Language Modeling Accessible to All Biologists☆156Mar 3, 2026Updated last week
- In silico directed evolution of peptide binders with AlphaFold☆261Jan 5, 2026Updated 2 months ago
- Official repository for DiffPepBuilder and DiffPepDock tools☆119Oct 24, 2025Updated 4 months ago
- Metal and Water prediction☆13Feb 5, 2025Updated last year
- ☆66Apr 8, 2025Updated 11 months ago
- Protein structure datasets for machine learning.☆115Apr 22, 2025Updated 10 months ago
- ML-optimized library design with improved fitness and diversity for protein engineering☆36Nov 5, 2025Updated 4 months ago
- Structure-conditioned masked language modeling for protein sequence design☆71Jan 31, 2024Updated 2 years ago
- Tutorial files☆12Aug 7, 2024Updated last year
- ☆17Dec 23, 2024Updated last year
- DyNoPy☆11Sep 5, 2024Updated last year
- Implementation of Protein Invariant Point Packer (PIPPack)☆35May 28, 2024Updated last year
- ☆31Dec 12, 2024Updated last year
- Active Learning-Assisted Directed Evolution for Protein Engineering☆80Oct 24, 2025Updated 4 months ago
- PLACER is graph neural network for local prediction of protein-ligand conformational ensembles.☆229Nov 5, 2025Updated 4 months ago
- Versatile computational pipeline for processing protein structure data for deep learning applications.☆274Feb 14, 2024Updated 2 years ago
- Python package for handling ModelCIF mmCIF and BinaryCIF files☆13Feb 12, 2026Updated 3 weeks ago
- ☆15Mar 28, 2025Updated 11 months ago
- ☆43Jan 10, 2024Updated 2 years ago
- A conditionally adapted protein language model for the generation of enzymes☆23Nov 26, 2024Updated last year
- Modelling protein conformational landscape with Alphafold☆56Aug 29, 2025Updated 6 months ago
- ☆33Nov 22, 2023Updated 2 years ago
- ☆96Oct 14, 2025Updated 4 months ago
- Protein structure diffusion model for unconditional protein generation and motif scaffolding☆188Jun 24, 2024Updated last year
- Diffusion-based all-atom protein generative model.☆233Aug 27, 2025Updated 6 months ago
- Utility scripts to generate and evaluate parametrically guided beta barrel protein backbone structures.☆14Nov 14, 2025Updated 3 months ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆120Aug 3, 2025Updated 7 months ago
- PLM based active learning model for protein engineering☆85Aug 6, 2024Updated last year
- Explicit crosslinks in AlphaFold 3☆23Mar 17, 2025Updated 11 months ago
- repo for DynamicBind: Predicting ligand-specific protein-ligand complex structure with a deep equivariant generative model☆286Dec 23, 2025Updated 2 months ago