adaptyvbio / ProteinFlow
Versatile computational pipeline for processing protein structure data for deep learning applications.
☆242Updated 9 months ago
Related projects ⓘ
Alternatives and complementary repositories for ProteinFlow
- Official repository for the ProteinGym benchmarks☆241Updated 3 weeks ago
- User friendly and accurate binder design pipeline☆300Updated 2 weeks ago
- Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies☆328Updated last year
- Joint sequence and structure generation with RoseTTAFold sequence space diffusion☆267Updated 3 weeks ago
- Efficient evolution from protein language models☆177Updated last year
- RoseTTAFold2 protein/nucleic acid complex prediction☆333Updated 5 months ago
- Compressing protein structures effectively with torsion angles☆162Updated 3 months ago
- Protein-ligand structure prediction☆205Updated 3 months ago
- ☆176Updated this week
- ☆236Updated 5 months ago
- A collection of *fold* tools☆290Updated 2 months ago
- Bilingual Language Model for Protein Sequence and Structure☆185Updated last month
- Deep learning models and structure realization scripts for the DeepAb antibody structure prediction method.☆148Updated last year
- NeuralPLexer: State-specific protein-ligand complex structure prediction with a multi-scale deep generative model☆267Updated 7 months ago
- trRosetta for protein design☆172Updated 3 years ago
- Protein hallucination and inpainting with RoseTTAFold☆246Updated last year
- DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Models☆225Updated 2 months ago
- Predict the structure of immune receptor proteins☆120Updated 5 months ago
- Public RFDiffusionAA repo☆321Updated 4 months ago
- Protein structure diffusion model for unconditional protein generation and motif scaffolding☆124Updated 5 months ago
- ☆249Updated 3 months ago
- BioPhi is an open-source antibody design platform. It features methods for automated antibody humanization (Sapiens), humanness evaluatio…☆154Updated 2 months ago
- Code for ColabDock paper☆127Updated last month
- AbLang: A language model for antibodies☆128Updated last year
- Official repository for the paper "Tranception: Protein Fitness Prediction with Autoregressive Transformers and Inference-time Retrieval"☆139Updated last year
- ☆228Updated 3 months ago
- Diffusion-based all-atom protein generative model.☆167Updated this week
- Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions☆137Updated 11 months ago
- Benchmarking framework for protein representation learning. Includes a large number of pre-training and downstream task datasets, models …☆203Updated 7 months ago
- Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm☆307Updated 10 months ago