Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning
β72Aug 13, 2025Updated last year
Alternatives and similar repositories for ProMEP
Users that are interested in ProMEP are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- β26Oct 8, 2024Updated last year
- 𧬠Fusion of protein sequence and structural information, using denoising pre-training network for zero-shot protein engineering (eLife 2β¦β97Jul 20, 2026Updated 2 months ago
- Generating and scoring novel enzyme sequences with a variety of models and metricsβ72Feb 21, 2026Updated 7 months ago
- 𧬠Augmenting zero-shot mutant prediction by retrieval-based logits fusion. (ISMB/ECCB 2025)β146Apr 25, 2026Updated 4 months ago
- β40Sep 17, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer β’ AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)β54Dec 3, 2024Updated last year
- PLM based active learning model for protein engineeringβ86Aug 6, 2024Updated 2 years ago
- β118Jan 3, 2026Updated 8 months ago
- Official repository of GENzymeβ66Nov 29, 2024Updated last year
- ML-optimized library design with improved fitness and diversity for protein engineeringβ37Nov 5, 2025Updated 10 months ago
- β41Jun 17, 2025Updated last year
- A protein structure dataset that combines 3D atomic coordinates with biophysical and evolutionary properties for every atom in every "cleβ¦β40Jul 25, 2024Updated 2 years ago
- Physical energy function for protein sequence designβ44May 6, 2023Updated 3 years ago
- This is the offical codebase to reproduce and use EVOLVEpro, a model for in silico directed evolution of protein activities using few-shoβ¦β377Jun 11, 2025Updated last year
- End-to-end encrypted cloud storage - Proton Drive β’ AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- π Fusion of sequence, structure and feature information to improve protein solubility prediction (IEEE BIBM 2024).β36May 16, 2025Updated last year
- Deconvolving mutation effects on protein stability and function with disentangled protein language modelsβ18May 15, 2026Updated 4 months ago
- β29Dec 2, 2024Updated last year
- 𧬠Advanced hybrid language model for directed protein evolution. (NeurIPS 2024)β162Jul 20, 2026Updated 2 months ago
- Mutational Effect Transfer Learning (METL) framework for pretraining and finetuning biophysics-informed protein language modelsβ64Feb 3, 2026Updated 7 months ago
- β38Feb 4, 2026Updated 7 months ago
- β33Aug 12, 2024Updated 2 years ago
- This is an official implementation for "MMSite: A Multi-modal Framework for the Identification of Active Sites in Proteins".β19Jan 4, 2025Updated last year
- β74Feb 13, 2026Updated 7 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer β’ AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A generalized enzyme kinetics parameter prediction model.β98Oct 2, 2025Updated 11 months ago
- Inference code for PoET: A generative model of protein families as sequences-of-sequencesβ107Apr 24, 2024Updated 2 years ago
- GNN trained to predict changes in thermodynamic stability for protein point mutantsβ273Sep 9, 2026Updated 2 weeks ago
- Structure-Informed Protein Language Modelβ40Feb 15, 2024Updated 2 years ago
- Official repository for the ProteinGym benchmarksβ473Mar 25, 2026Updated 5 months ago
- β15Mar 28, 2025Updated last year
- Active Learning-Assisted Directed Evolution for Protein Engineeringβ87Oct 24, 2025Updated 10 months ago
- ProTrek: illuminating the Protein Universe through Trimodal Protein Language Model (Connecting text and protein)β217May 15, 2026Updated 4 months ago
- β42Aug 20, 2026Updated last month
- Wordpress hosting with auto-scaling - Free Trial Offer β’ AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- β32Oct 7, 2025Updated 11 months ago
- β146Jun 3, 2025Updated last year
- Graphormer Based Protein Sequence Designβ26Feb 2, 2024Updated 2 years ago
- Saprot: Protein Language Model with Structural Alphabet (AA+3Di)β634Mar 8, 2026Updated 6 months ago
- β27Dec 11, 2024Updated last year
- β150Jul 16, 2025Updated last year
- Generative diverse protein backbones by protein language modelβ35Feb 27, 2026Updated 6 months ago