Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning
β72Aug 13, 2025Updated 11 months ago
Alternatives and similar repositories for ProMEP
Users that are interested in ProMEP are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- β26Oct 8, 2024Updated last year
- 𧬠Fusion of protein sequence and structural information, using denoising pre-training network for zero-shot protein engineering (eLife 2β¦β97Updated this week
- Generating and scoring novel enzyme sequences with a variety of models and metricsβ72Feb 21, 2026Updated 5 months ago
- 𧬠Augmenting zero-shot mutant prediction by retrieval-based logits fusion. (ISMB/ECCB 2025)β137Apr 25, 2026Updated 3 months ago
- β40Sep 17, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer β’ AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)β53Dec 3, 2024Updated last year
- PLM based active learning model for protein engineeringβ86Aug 6, 2024Updated last year
- β118Jan 3, 2026Updated 6 months ago
- Official repository of GENzymeβ65Nov 29, 2024Updated last year
- ML-optimized library design with improved fitness and diversity for protein engineeringβ37Nov 5, 2025Updated 8 months ago
- β40Jun 17, 2025Updated last year
- A protein structure dataset that combines 3D atomic coordinates with biophysical and evolutionary properties for every atom in every "cleβ¦β38Jul 25, 2024Updated last year
- Physical energy function for protein sequence designβ42May 6, 2023Updated 3 years ago
- This is the offical codebase to reproduce and use EVOLVEpro, a model for in silico directed evolution of protein activities using few-shoβ¦β367Jun 11, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer β’ AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- π Fusion of sequence, structure and feature information to improve protein solubility prediction (IEEE BIBM 2024).β36May 16, 2025Updated last year
- Deconvolving mutation effects on protein stability and function with disentangled protein language modelsβ18May 15, 2026Updated 2 months ago
- β26Dec 2, 2024Updated last year
- 𧬠Advanced hybrid language model for directed protein evolution. (NeurIPS 2024)β158Updated this week
- Mutational Effect Transfer Learning (METL) framework for pretraining and finetuning biophysics-informed protein language modelsβ64Feb 3, 2026Updated 5 months ago
- β34Feb 4, 2026Updated 5 months ago
- β33Aug 12, 2024Updated last year
- This is an official implementation for "MMSite: A Multi-modal Framework for the Identification of Active Sites in Proteins".β18Jan 4, 2025Updated last year
- β74Feb 13, 2026Updated 5 months ago
- 1-Click AI Models by DigitalOcean Gradient β’ AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A generalized enzyme kinetics parameter prediction model.β96Oct 2, 2025Updated 9 months ago
- Inference code for PoET: A generative model of protein families as sequences-of-sequencesβ104Apr 24, 2024Updated 2 years ago
- GNN trained to predict changes in thermodynamic stability for protein point mutantsβ259Mar 26, 2026Updated 3 months ago
- Structure-Informed Protein Language Modelβ39Feb 15, 2024Updated 2 years ago
- Official repository for the ProteinGym benchmarksβ452Mar 25, 2026Updated 4 months ago
- β15Mar 28, 2025Updated last year
- ProTrek: illuminating the Protein Universe through Trimodal Protein Language Model (Connecting text and protein)β210May 15, 2026Updated 2 months ago
- Active Learning-Assisted Directed Evolution for Protein Engineeringβ83Oct 24, 2025Updated 9 months ago
- β42Mar 16, 2026Updated 4 months ago
- Open source password manager - Proton Pass β’ AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- β32Oct 7, 2025Updated 9 months ago
- β144Jun 3, 2025Updated last year
- Graphormer Based Protein Sequence Designβ26Feb 2, 2024Updated 2 years ago
- Saprot: Protein Language Model with Structural Alphabet (AA+3Di)β613Mar 8, 2026Updated 4 months ago
- β151Jul 16, 2025Updated last year
- β25Dec 11, 2024Updated last year
- Generative diverse protein backbones by protein language modelβ35Feb 27, 2026Updated 4 months ago