ohuelab / Solubility_AfDesign
Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol
☆31Updated last year
Alternatives and similar repositories for Solubility_AfDesign:
Users that are interested in Solubility_AfDesign are comparing it to the libraries listed below
- ☆41Updated 4 months ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆39Updated last month
- ☆28Updated last year
- Code for humanization of antibody and nanobody☆33Updated last month
- ☆51Updated 9 months ago
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆35Updated last month
- ☆24Updated this week
- ☆28Updated last year
- ML-optimized library design with improved fitness and diversity for protein engineering☆27Updated 5 months ago
- Official repository of GENzyme☆40Updated last month
- Making Protein folding accessible to all!☆19Updated last year
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆35Updated 3 months ago
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆44Updated 3 weeks ago
- ☆24Updated 6 months ago
- ☆15Updated 2 months ago
- P450Diffusion: A tool for designing P450 sequences based on diffusion model☆21Updated 6 months ago
- scripts to find PBD structures for cancer driver proteins☆29Updated this week
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆30Updated 2 months ago
- ☆32Updated 4 months ago
- ☆59Updated last month
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆54Updated last year
- Pro-FSFP: Few-Shot Protein Fitness Prediction☆72Updated last week
- ☆72Updated 8 months ago
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆68Updated this week
- ☆24Updated 5 months ago
- Code of “Multi-Modal Deep Learning Enables Ultrafast and Accurate Annotation of Enzymatic Active Sites”☆23Updated last week
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆38Updated 8 months ago
- Efficient manipulation of protein structures in Python☆50Updated 2 months ago
- ☆30Updated 3 months ago
- This repository houses all the scripts and notebooks utilized for generating, analyzing, and validating the mdCATH dataset. Some user ex…☆31Updated last month