lauramarie99 / ProtDesign2
ProteinDesign with RFdiffusion and ProteinMPNN/LigandMPNN
☆12Updated 2 months ago
Alternatives and similar repositories for ProtDesign2:
Users that are interested in ProtDesign2 are comparing it to the libraries listed below
- bakerlab pymol scripts☆23Updated 5 years ago
- ☆13Updated last month
- GRACE: Generative Renaissance in Artificial Computational Enzyme Design☆16Updated 4 months ago
- ☆13Updated last year
- Code for deep learning guided design of dynamic proteins☆17Updated 9 months ago
- Binding pocket optimization based on force fields and docking scoring functions☆31Updated last month
- scripts to find PBD structures for cancer driver proteins☆31Updated 2 months ago
- ☆9Updated last year
- Demos of many Rosetta applications☆17Updated 7 months ago
- Some scripts that I keep using over and over.☆18Updated 4 months ago
- DyNoPy☆11Updated 8 months ago
- ☆26Updated 9 months ago
- Code for ApoDock☆20Updated last month
- ☆31Updated last year
- A Python framework for the rapid modeling of glycans☆15Updated 3 months ago
- Extension of ThermoMPNN for double mutant predictions☆32Updated last month
- ☆14Updated 7 months ago
- Kuhlman Lab Installation of AlphaFold3☆25Updated last month
- ☆26Updated 3 months ago
- Extract ligand binding sites from PDB. Match the binding sites to de novo scaffolds.☆11Updated 4 years ago
- This repository contains the AlphaCutter.py for the removal of non-globular regions from predicted protein structures.☆15Updated last year
- Making Protein folding accessible to all!☆22Updated last year
- Pocket to Concavity is a tool for refinement of Protein-Ligand binding site shape from alpha-spheres☆16Updated 7 months ago
- Some Rosetta Scripts that allow for various simple tasks☆14Updated 5 years ago
- ☆21Updated 4 months ago
- GUI for interactive graph-based analyses of hydrogen bond networks in crystal structures and MD trajectories.☆9Updated 2 years ago
- ☆25Updated 10 months ago
- ☆21Updated 4 months ago
- ☆15Updated 11 months ago
- Explicit crosslinks in AlphaFold 3☆21Updated last month