johnyang101 / pmpnndiffLinks
Repository for Fast Non-autoregressive Inverse Folding with Discrete Diffusion
☆18Updated last year
Alternatives and similar repositories for pmpnndiff
Users that are interested in pmpnndiff are comparing it to the libraries listed below
Sorting:
- Implementation of Protein Invariant Point Packer (PIPPack)☆35Updated last year
- Protein representation and design under a single training scheme☆24Updated last month
- ☆39Updated last year
- ☆28Updated 2 months ago
- protein structure generation with sparse all-atom denoising models☆55Updated last month
- A conditionally adapted protein language model for the generation of enzymes☆23Updated last year
- Meta learning addresses noisy and under-labeled data in machine learning-guided antibody engineering (https://doi.org/10.1016/j.cels.2023…☆20Updated last year
- Official implementation of NeurIPS'24 paper "Bridge-IF: Learning Inverse Protein Folding with Markov Bridges"☆18Updated 10 months ago
- ☆13Updated last year
- ☆20Updated 3 years ago
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆37Updated last year
- Generative diverse protein backbones by protein language model☆34Updated 3 months ago
- dMaSIF implementation for google colab☆36Updated 2 years ago
- ☆30Updated last year
- Adapting protein language models for structure-conditioned design☆40Updated last year
- Metrics to evaluate distributional coverage of generative models of protein structures.☆18Updated 5 months ago
- Precise Generation of Conformational Ensembles for Intrinsically Disordered Proteins with IDPFold☆26Updated last year
- Building more accurate protein structures from backbone torsion angles☆14Updated 10 months ago
- Versatile human antibody sequence design☆21Updated 8 months ago
- ☆82Updated last month
- ☆15Updated 4 months ago
- ☆33Updated last year
- Tutorial files☆12Updated last year
- This is the official code repository for the paper FLOP: Tasks for Fitness Landscapes Of Protein wildtypes by Groth et al.☆22Updated 2 years ago
- PDBench is a dataset and software package for evaluating fixed-backbone sequence design algorithms.☆32Updated 3 years ago
- Some scripts that I keep using over and over.☆21Updated 6 months ago
- ☆12Updated last year
- Code for deep learning guided design of dynamic proteins☆32Updated last year
- Conditioning diffusion models for scaffolding protein motifs. A repository for my master's dissertation.☆11Updated last year
- LatentDE: Latent-based Directed Evolution for Protein Sequence Design☆36Updated 9 months ago