Alternatives and similar repositories for rf_diffusion_all_atom

Users that are interested in rf_diffusion_all_atom are comparing it to the libraries listed below

• dauparas / LigandMPNN
  ☆418Updated 6 months ago
• nrbennet / dl_binder_design
  ☆338Updated last year
• martinpacesa / BindCraft
  User friendly and accurate binder design pipeline
  ☆621Updated 2 weeks ago
• Graylab / IgFold
  Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies
  ☆366Updated last year
• RosettaCommons / RFDesign
  Protein hallucination and inpainting with RoseTTAFold
  ☆263Updated 2 years ago
• RosettaCommons / protein_generator
  Joint sequence and structure generation with RoseTTAFold sequence space diffusion
  ☆316Updated 9 months ago
• zrqiao / NeuralPLexer
  NeuralPLexer: State-specific protein-ligand complex structure prediction with a multi-scale deep generative model
  ☆303Updated last year
• sokrypton / ColabDesign
  Making Protein Design accessible to all via Google Colab!
  ☆764Updated last month
• RosettaCommons / RFantibody
  ☆255Updated 3 months ago
• bjornwallner / DockQ
  DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Models
  ☆311Updated 6 months ago
• RosettaCommons / rosetta
  The Rosetta Bio-macromolecule modeling package.
  ☆298Updated last week
• RosettaCommons / PyRosetta.notebooks
  Jupyter Notebooks for learning the PyRosetta platform for biomolecular structure prediction and design
  ☆595Updated 11 months ago
• luwei0917 / DynamicBind
  repo for DynamicBind: Predicting ligand-specific protein-ligand complex structure with a deep equivariant generative model
  ☆261Updated last year
• rdk / p2rank
  P2Rank: Protein-ligand binding site prediction from protein structure based on machine learning.
  ☆332Updated last month
• baker-laboratory / RoseTTAFold-All-Atom
  ☆738Updated 2 months ago
• Graylab / DL4Proteins-notebooks
  Colab Notebooks covering deep learning tools for biomolecular structure prediction and design
  ☆411Updated 4 months ago
• luost26 / diffab
  ✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)
  ☆338Updated 2 years ago
• ChatMol / ChatMol
  ChatMol
  ☆232Updated 4 months ago
• uw-ipd / RoseTTAFold2NA
  RoseTTAFold2 protein/nucleic acid complex prediction
  ☆361Updated last year
• bjing2016 / alphaflow
  AlphaFold Meets Flow Matching for Generating Protein Ensembles
  ☆465Updated 6 months ago
• maabuu / posebusters
  Plausibility checks for generated molecule poses.
  ☆309Updated 3 weeks ago
• mat10d / EvolvePro
  This is the offical codebase to reproduce and use EVOLVEpro, a model for in silico directed evolution of protein activities using few-sho…
  ☆275Updated last month
• OATML-Markslab / ProteinGym
  Official repository for the ProteinGym benchmarks
  ☆337Updated 2 weeks ago
• microsoft / AI2BMD
  AI-powered ab initio biomolecular dynamics simulation
  ☆533Updated 5 months ago
• Zuricho / ProteinDesignLabs
  List of computational protein design research labs
  ☆188Updated 5 months ago
• ProteinDesignLab / protpardelle
  Diffusion-based all-atom protein generative model.
  ☆210Updated 5 months ago
• Discngine / fpocket
  fpocket is a very fast open source protein pocket detection algorithm based on Voronoi tessellation. The platform is suited for the scien…
  ☆367Updated 10 months ago
• pharmai / plip
  Protein-Ligand Interaction Profiler - Analyze and visualize non-covalent protein-ligand interactions in PDB files according to 📝 Adasme …
  ☆564Updated last month
• biolists / folding_tools
  A collection of *fold* tools
  ☆295Updated 10 months ago
• patrickbryant1 / EvoBind
  In silico directed evolution of peptide binders with AlphaFold
  ☆219Updated 2 weeks ago