Alternatives and similar repositories for rf_diffusion_all_atom

Users that are interested in rf_diffusion_all_atom are comparing it to the libraries listed below

• nrbennet / dl_binder_design
  ☆313Updated 10 months ago
• dauparas / LigandMPNN
  ☆382Updated 4 months ago
• martinpacesa / BindCraft
  User friendly and accurate binder design pipeline
  ☆539Updated this week
• RosettaCommons / RFDesign
  Protein hallucination and inpainting with RoseTTAFold
  ☆259Updated 2 years ago
• Graylab / IgFold
  Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies
  ☆360Updated last year
• bjornwallner / DockQ
  DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Models
  ☆284Updated 4 months ago
• RosettaCommons / RFantibody
  ☆216Updated last month
• RosettaCommons / protein_generator
  Joint sequence and structure generation with RoseTTAFold sequence space diffusion
  ☆312Updated 7 months ago
• zrqiao / NeuralPLexer
  NeuralPLexer: State-specific protein-ligand complex structure prediction with a multi-scale deep generative model
  ☆292Updated last year
• uw-ipd / RoseTTAFold2
  ☆194Updated last month
• baker-laboratory / RoseTTAFold-All-Atom
  ☆722Updated last week
• luost26 / diffab
  ✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)
  ☆322Updated last year
• bjing2016 / alphaflow
  AlphaFold Meets Flow Matching for Generating Protein Ensembles
  ☆440Updated 4 months ago
• sokrypton / ColabDesign
  Making Protein Design accessible to all via Google Colab!
  ☆733Updated 3 weeks ago
• rdk / p2rank
  P2Rank: Protein-ligand binding site prediction from protein structure based on machine learning.
  ☆328Updated last month
• OATML-Markslab / ProteinGym
  Official repository for the ProteinGym benchmarks
  ☆311Updated last month
• Kuhlman-Lab / ThermoMPNN
  GNN trained to predict changes in thermodynamic stability for protein point mutants
  ☆172Updated 3 months ago
• uw-ipd / RoseTTAFold2NA
  RoseTTAFold2 protein/nucleic acid complex prediction
  ☆360Updated last year
• luwei0917 / DynamicBind
  repo for DynamicBind: Predicting ligand-specific protein-ligand complex structure with a deep equivariant generative model
  ☆246Updated last year
• mat10d / EvolvePro
  This is the offical codebase to reproduce and use EVOLVEpro, a model for in silico directed evolution of protein activities using few-sho…
  ☆255Updated 2 months ago
• RosettaCommons / rosetta
  The Rosetta Bio-macromolecule modeling package.
  ☆269Updated this week
• Zuricho / ProteinDesignLabs
  List of computational protein design research labs
  ☆177Updated 3 months ago
• ikalvet / heme_binder_diffusion
  ☆128Updated 7 months ago
• ChatMol / ChatMol
  ChatMol
  ☆229Updated 2 months ago
• ProteinDesignLab / protpardelle
  Diffusion-based all-atom protein generative model.
  ☆198Updated 3 months ago
• patrickbryant1 / Umol
  Protein-ligand structure prediction
  ☆216Updated 10 months ago
• maabuu / posebusters
  Plausibility checks for generated molecule poses.
  ☆286Updated last week
• baker-laboratory / PLACER
  PLACER is graph neural network for local prediction of protein-ligand conformational ensembles.
  ☆130Updated 2 months ago
• plinder-org / plinder
  Protein Ligand INteraction Dataset and Evaluation Resource
  ☆223Updated last month
• rifdock / rifdock
  Rifdock Library for Conformational Search
  ☆158Updated last year