Ryan-Hu-Hu-Hu / GRACELinks
GRACE: Generative Renaissance in Artificial Computational Enzyme Design
☆19Updated 9 months ago
Alternatives and similar repositories for GRACE
Users that are interested in GRACE are comparing it to the libraries listed below
Sorting:
- ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.☆34Updated last month
- ☆60Updated last week
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆66Updated 3 months ago
- Physics-Guided All-Atom Diffusion Model for Accurate Protein-Ligand Complex Prediction☆82Updated 3 weeks ago
- Utility for building inverse rotamer assemblies out of a Rosetta matcher/enzdes constraint file.☆25Updated 7 months ago
- ☆11Updated 5 months ago
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆45Updated 11 months ago
- Code release for "Improving diffusion-based protein backbone generation with global-geometry-aware latent encoding"☆42Updated 2 months ago
- ML-optimized library design with improved fitness and diversity for protein engineering☆36Updated last year
- ☆24Updated 5 months ago
- ☆33Updated last year
- ☆29Updated 3 weeks ago
- ☆37Updated 6 months ago
- Extension of ThermoMPNN for double mutant predictions☆43Updated 3 weeks ago
- A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation☆76Updated 2 months ago
- This repository contains the codebase for the paper "Leveraging ancestral sequence reconstruction for protein representation learning".☆12Updated 6 months ago
- ☆44Updated last year
- Machine Learning models for in vitro enzyme kinetic parameter prediction☆60Updated 6 months ago
- ☆37Updated 3 months ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆68Updated 3 months ago
- ☆48Updated 4 months ago
- Rosetta Funclib☆23Updated 5 years ago
- Official repository of GENzyme☆55Updated 11 months ago
- ☆78Updated 8 months ago
- ☆62Updated last year
- code for IDR binding paper 2025☆56Updated 8 months ago
- The official code repository of "OmniESI: A unified framework for enzyme-substrate interaction prediction with progressive conditional de…☆22Updated 2 months ago
- ☆60Updated 6 months ago
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆39Updated last year
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆32Updated last year