jozhang97 / MutateEverythingLinks
☆79Updated 3 months ago
Alternatives and similar repositories for MutateEverything
Users that are interested in MutateEverything are comparing it to the libraries listed below
Sorting:
- Rotamer Density Estimator is an Unsupervised Learner of the Effect of Mutations on Protein-Protein Interaction (ICLR 2023)☆59Updated last year
- Structure-conditioned masked language modeling for protein sequence design☆69Updated last year
- ☆65Updated 2 years ago
- A comprehensive benchmark on the performances of multiple protein backbone generative models.☆64Updated 4 months ago
- ☆107Updated 2 years ago
- Official repository of EnzymeFlow☆94Updated 10 months ago
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆119Updated 7 months ago
- All-atom protein generation using latent diffusion, with compositional function and taxonomic prompts. http://bit.ly/plaid-proteins☆114Updated 4 months ago
- Aligning protein generative models with experimental fitness☆108Updated 2 months ago
- [NeurIPS 2024] MSA generative pretraining for advancing protein structure prediction☆33Updated 7 months ago
- ☆119Updated 4 months ago
- RNAFlow: RNA Structure & Sequence Design via Inverse Folding-Based Flow Matching☆70Updated last year
- Codebase of the paper "Str2Str: A Score-based Framework for Zero-shot Protein Conformation Sampling" (ICLR 2024)☆78Updated last year
- ☆76Updated 8 months ago
- ☆28Updated 6 months ago
- Generative Language Modeling for Antibody Design☆168Updated last year
- ☆42Updated last month
- A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design☆107Updated last year
- Joint embedding of protein sequence and structure with discrete and continuous compressions of protein folding model latent spaces. http:…☆138Updated 6 months ago
- Efficient implementatin of ESM family.☆74Updated last month
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆119Updated 7 months ago
- ☆116Updated 4 months ago
- This repo contains the codes for our paper Conditional Antibody Design as 3D Equivariant Graph Translation.☆97Updated 2 years ago
- Official repository of ReactZyme☆36Updated last year
- A standardized protein design benchmark for motif-scaffolding problems☆68Updated 2 months ago
- Protein structure diffusion model for unconditional protein generation and motif scaffolding☆172Updated last year
- Implementation of DiffPack: A Torsional Diffusion Model for Autoregressive Protein Side-Chain Packing☆89Updated last year
- ☆112Updated 2 years ago
- Official Implementation of IgGM☆143Updated 3 weeks ago
- This repository implements Gibbs sampling with Graph-based Smoothing☆39Updated last year