☆81Jun 29, 2025Updated 11 months ago
Alternatives and similar repositories for MutateEverything
Users that are interested in MutateEverything are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆40Mar 30, 2025Updated last year
- Gibbs sampling for generating protein sequences☆58Jan 17, 2025Updated last year
- ☆23Jul 14, 2023Updated 2 years ago
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆257Mar 26, 2026Updated 2 months ago
- Aligning protein generative models with experimental fitness☆122Mar 12, 2026Updated 3 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆72Feb 21, 2026Updated 3 months ago
- Diffusion-based all-atom protein generative model.☆236Aug 27, 2025Updated 9 months ago
- 🧬 Augmenting zero-shot mutant prediction by retrieval-based logits fusion. (ISMB/ECCB 2025)☆133Apr 25, 2026Updated last month
- This is the official code repository for the paper NeurIPS 2024 spotlight paper "Kermut: Composite kernel regression for protein variant …☆44Aug 5, 2025Updated 10 months ago
- ☆132Feb 1, 2026Updated 4 months ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆112Apr 15, 2026Updated last month
- The official GitHub repository for the Nature Communications paper "Computational Design of Generalist Cyclopropanases with Stereodiverge…☆15Jan 23, 2026Updated 4 months ago
- ☆74Feb 13, 2026Updated 4 months ago
- Protein structure diffusion model for unconditional protein generation and motif scaffolding☆192Jun 24, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Python package to atom map, correct and suggest enzymatic reactions☆46Apr 11, 2024Updated 2 years ago
- ☆40Sep 17, 2024Updated last year
- ☆139Jun 3, 2025Updated last year
- Structure-conditioned masked language modeling for protein sequence design☆74Jan 31, 2024Updated 2 years ago
- Scoring methods for predicting the DDG upon protein mutation☆17Feb 20, 2023Updated 3 years ago
- Neural networks to fit interpretable models and quantify energies, energetic couplings, epistasis, and allostery from deep mutational sca…☆56Apr 10, 2025Updated last year
- NeurIPS 2023 Spotlight paper: Full atom protein pocket design via iterative refinement☆49Oct 28, 2023Updated 2 years ago
- Official repository for the ProteinGym benchmarks☆435Mar 25, 2026Updated 2 months ago
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆100Apr 24, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆258Jul 31, 2024Updated last year
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆130Nov 19, 2025Updated 6 months ago
- DDGScan: an integrated parallel workflow for the in silico point mutation scan of protein☆49Mar 21, 2024Updated 2 years ago
- Iterative masking algorithm on MSA Transformer to generate synthetic sequences☆30Jan 17, 2024Updated 2 years ago
- The official implementation of the ICLR'23 paper PiFold: Toward effective and efficient protein inverse folding.☆184Jun 17, 2023Updated 2 years ago
- Generative diverse protein backbones by protein language model☆35Feb 27, 2026Updated 3 months ago
- ☆27Feb 10, 2024Updated 2 years ago
- ☆118Dec 7, 2022Updated 3 years ago
- Reaction-Conditioned Virtual Screening of Enzymes☆45Jun 11, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Finding patch of conserved amino acid sites in 3D structure☆14Apr 13, 2025Updated last year
- De Novo Protein Design by Equivariantly Diffusing Oriented Residue Clouds☆188Apr 21, 2024Updated 2 years ago
- Sidechain conditioning and modeling for full-atom protein sequence design☆140Nov 11, 2025Updated 7 months ago
- Utility scripts to generate and evaluate parametrically guided beta barrel protein backbone structures.☆13Nov 14, 2025Updated 7 months ago
- Adapting protein language models for structure-conditioned design☆42Aug 5, 2024Updated last year
- Rifdock Library for Conformational Search☆174May 16, 2024Updated 2 years ago
- VenusFSFP: Few-Shot Protein Fitness Prediction☆116Nov 18, 2025Updated 6 months ago