The MARVEL assembler
☆80Jul 7, 2023Updated 2 years ago
Alternatives and similar repositories for MARVEL
Users that are interested in MARVEL are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A tool for recovering synteny blocks from multiple alignment☆33Oct 18, 2021Updated 4 years ago
- Making diploid assembly becomes common practice for genomic study☆30Oct 2, 2017Updated 8 years ago
- SALSA: A tool to scaffold long read assemblies with Hi-C data☆189May 17, 2024Updated last year
- TULIP - The Uncorrected Long read Itegration Pipeline☆27Jan 15, 2018Updated 8 years ago
- Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads. http://genome.cshlp.org/content/early/2017/01/18/gr…☆297May 9, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Ultra-fast de novo assembler using long noisy reads☆136Feb 24, 2021Updated 5 years ago
- ☆26Oct 31, 2019Updated 6 years ago
- A loose collection of scripts and utilities for processing and analyzing the Goat reference genome assembly☆11Feb 28, 2017Updated 9 years ago
- A Hi-C scaffolding method☆22Dec 22, 2021Updated 4 years ago
- [MOVED] Moved to paoloshasta/shasta. De novo assembly from Oxford Nanopore reads☆273Oct 13, 2022Updated 3 years ago
- Evaluate variant calls and its combination with k-mer multiplicity☆68Dec 2, 2022Updated 3 years ago
- A fuzzy Bruijn graph approach to long noisy reads assembly☆39Mar 15, 2017Updated 9 years ago
- Generate an interactive dot plot from mummer or minimap alignments☆215Jan 17, 2024Updated 2 years ago
- Chromosome-level scaffolding using multiple references☆166Sep 8, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Scaffolding with RNA-seq read alignment☆21Jul 10, 2018Updated 7 years ago
- FALCON-Phase integrates PacBio long-read assemblies with Phase Genomics Hi-C data to create phased, diploid, chromosome-scale scaffolds☆72Nov 12, 2020Updated 5 years ago
- Correction of palindromes in long reads from PacBio and Nanopore☆14Mar 1, 2022Updated 4 years ago
- Simple tools for working with Hi-C data☆18Dec 19, 2018Updated 7 years ago
- Peregrine: Fast Genome Assembler Using SHIMMER Index☆102Feb 6, 2022Updated 4 years ago