shingocat / lrscafLinks
TGS scaffolding
☆46Updated 3 years ago
Alternatives and similar repositories for lrscaf
Users that are interested in lrscaf are comparing it to the libraries listed below
Sorting:
- Tool for assessing/improving assembly quality in extra-long tandem repeats☆47Updated 4 years ago
- ☆77Updated 5 years ago
- A python script for finding telomeric repeats (TTAGGG/CCCTAA) in FASTA files☆34Updated 3 years ago
- finshingTool☆54Updated 8 years ago
- Identification of transposable element families from pangenome polymorphisms☆53Updated 2 months ago
- calling SVs from Blasr contig level alignments☆54Updated 7 years ago
- use long sequenced reads to close gaps in assemblies☆38Updated 6 years ago
- Scripts to estimate genome size and coverage from kmer distribution generated by jellyfish☆57Updated 2 years ago
- ☆44Updated 8 years ago
- ☆64Updated last month
- Show pangenome graphs in an easy way☆56Updated 3 weeks ago
- ☆32Updated 4 years ago
- A tool for evaluating long-read de novo assembly results☆39Updated last year
- A program to call variants from genome alignment☆81Updated 4 months ago
- A tool for the recovery of unassembled telomeres from soft-clipped read alignments.☆41Updated 4 months ago
- Call select base modifications in PacBio HiFi reads☆13Updated 7 months ago
- TSEBRA: Transcript Selector for BRAKER☆47Updated 9 months ago
- A tool for evaluate long-read de novo assembly results☆48Updated last year
- ☆36Updated 2 years ago
- Python wrappers for programs that search for transposable elements☆19Updated 9 years ago
- Toolkit for evolutionary analyses of linkage groups☆32Updated last year
- A software to assemble chloroplast and mitochodrial genomes using PacBio data☆40Updated 5 years ago
- An easy way to run BioNano genomic analysis☆28Updated 4 years ago
- A shiny application to visualize MCscan result☆37Updated 2 years ago
- Genome Annotation Pipeline☆36Updated last year
- ☆30Updated 7 months ago
- Custom tools to 'facilitate' BioNano Genomics data analysis☆34Updated 6 years ago
- Segmental Duplication Assembler (SDA).☆44Updated 2 years ago
- Gapless provides combined scaffolding, gap-closing and assembly correction with long reads☆37Updated 2 years ago
- Create a pseudohaploid assembly from a partially resolved diploid assembly☆32Updated 5 years ago