DRL / kinfinLinks
Taxon-aware analysis of clustered protein sequences
☆31Updated last year
Alternatives and similar repositories for kinfin
Users that are interested in kinfin are comparing it to the libraries listed below
Sorting:
- scripts to parse and analyse MCScanX collinearity output☆32Updated 5 years ago
- Improved Phased Assembler☆28Updated 3 years ago
- A high performance tool to identify orthologs and paralogs across genomes.☆26Updated 2 years ago
- A tool for recovering synteny blocks from multiple alignment☆30Updated 3 years ago
- a broadly applicable tool for automated gene identification and retrieval☆32Updated 7 months ago
- PoSeiDon: positive selection detection and recombination analysis pipeline☆38Updated 4 months ago
- An R package to infer and analyze synteny networks from protein sequences☆30Updated 7 months ago
- CAMSA: a tool for Comparative Analysis and Merging of Scaffold Assemblies☆24Updated 5 years ago
- Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.☆29Updated 7 years ago
- Consensus genome annotation using OMA☆26Updated 3 weeks ago
- Software that separates very close sequences that have been collapsed during assembly. Uses only long reads.☆35Updated 2 months ago
- Linear-time de novo Long Read Assembler☆42Updated 5 months ago
- ☆27Updated last year
- Phylogenetic Analysis of Long Terminal Repeat Retrotransposons☆17Updated 2 years ago
- a tree splitting and pruning algorithm for retrieving single-copy orthologs from gene family trees☆26Updated 5 months ago
- FastK based version of Merqury☆26Updated last month
- A tool for the recovery of unassembled telomeres from soft-clipped read alignments.☆40Updated 3 months ago
- ☆26Updated 4 years ago
- Fast long-read mapper and whole-genome aligner (accelerated version of minimap2)☆33Updated 3 weeks ago
- ☆20Updated last year
- ☆25Updated 10 months ago
- PSAURON is a machine learning model for rapid assessment of protein coding gene annotation☆33Updated 3 months ago
- Genome assembly scaffolding using information from paired-end/mate-pair libraries, long reads, and synteny to closely related species.☆24Updated 6 years ago
- Scaffolding with assembly likelihood optimization☆22Updated 4 years ago
- Tool for decomposition centromeric assemblies and long reads into monomers☆36Updated 2 years ago
- WGS (Wheat) Robust Assembly Pipeline☆22Updated 3 years ago
- Unzip assembly graphs with Hi-C data and/or long reads.☆28Updated 9 months ago
- Hapo-G is a tool that aims to improve the quality of genome assemblies by polishing the consensus with accurate reads.☆25Updated last year
- Annotated Genome Optimization Using Transcriptome Information☆20Updated 5 years ago
- A Python package for testing evolutionary hypotheses in genome-wide approaches.☆31Updated 4 years ago