DRL / kinfinLinks
Taxon-aware analysis of clustered protein sequences
☆31Updated last year
Alternatives and similar repositories for kinfin
Users that are interested in kinfin are comparing it to the libraries listed below
Sorting:
- CAMSA: a tool for Comparative Analysis and Merging of Scaffold Assemblies☆24Updated 5 years ago
- A tool for recovering synteny blocks from multiple alignment☆30Updated 3 years ago
- PoSeiDon: positive selection detection and recombination analysis pipeline☆38Updated 2 weeks ago
- scripts to parse and analyse MCScanX collinearity output☆32Updated 5 years ago
- Software that separates very close sequences that have been collapsed during assembly. Uses only long reads.☆35Updated 5 months ago
- Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.☆29Updated 7 years ago
- Improved Phased Assembler☆28Updated 3 years ago
- a broadly applicable tool for automated gene identification and retrieval☆31Updated 10 months ago
- Infering ancestral synteny with hierarchical orthologous groups☆31Updated last week
- Fast long-read mapper and whole-genome aligner (accelerated version of minimap2)☆35Updated 3 months ago
- Genome assembly scaffolding using information from paired-end/mate-pair libraries, long reads, and synteny to closely related species.☆24Updated 6 years ago
- FastK based version of Merqury☆28Updated 2 weeks ago
- ☆26Updated 4 years ago
- Correcting errors in noisy long reads using variation graphs☆51Updated 2 years ago
- A high performance tool to identify orthologs and paralogs across genomes.☆27Updated 2 years ago
- Scaffolding with assembly likelihood optimization☆21Updated 4 years ago
- PSAURON is a machine learning model for rapid assessment of protein coding gene annotation☆40Updated 2 weeks ago
- Consensus genome annotation using OMA☆26Updated 3 months ago
- ☆45Updated 2 months ago
- An R package to infer and analyze synteny networks from protein sequences☆32Updated 2 months ago
- Phylogenetic Analysis of Long Terminal Repeat Retrotransposons☆18Updated 3 years ago
- Add multiple thread function for genome comparison☆16Updated 4 years ago
- In-depth characterization and annotation of differences between two sets of DNA sequences☆62Updated 5 years ago
- CAAStools is a bioinformatics toolbox that allows the user to identify and validate CAAS on MSA of orthologous proteins.☆21Updated last year
- Pangenome Sequence Naming: a backwards-compatible hack to simplify the identification of samples and haplotypes in pangenomes☆40Updated 11 months ago
- Better Alignments with Translated HMMER☆23Updated this week
- Visualising discordant reads☆15Updated 10 years ago
- A comparative genome scaffolding tool☆16Updated 7 years ago
- Tool for decomposition centromeric assemblies and long reads into monomers☆35Updated 3 years ago
- a tree splitting and pruning algorithm for retrieving single-copy orthologs from gene family trees☆26Updated 3 weeks ago