PacificBiosciences / FALCON_unzipLinks
Making diploid assembly becomes common practice for genomic study
☆30Updated 7 years ago
Alternatives and similar repositories for FALCON_unzip
Users that are interested in FALCON_unzip are comparing it to the libraries listed below
Sorting:
- An easy way to run BioNano genomic analysis☆27Updated 4 years ago
- MarginPolish: Graph based assembly polishing☆46Updated 4 years ago
- Pipeline for scaffolding and breaking a genome assembly using 10x genomics linked-reads☆22Updated 2 years ago
- ☆34Updated 5 years ago
- ☆48Updated 11 months ago
- Improved Phased Assembler☆28Updated 3 years ago
- Compute N50/NG50 and auN/auNG☆32Updated last year
- Exact Tandem Repeat Finder (not a TRF replacement)☆49Updated 5 years ago
- Miscellaneous scripts for applications of PacBio systems☆27Updated 3 years ago
- Converting and demultiplexing of PacBio BAM files into gzipped fasta and fastq files.☆37Updated 2 years ago
- Swipe your Structural Variants called on long (ONT/PacBio) reads with short exact (Illumina) reads.☆32Updated 2 years ago
- calling SVs from Blasr contig level alignments☆54Updated 7 years ago
- Genome assembly scaffolding using information from paired-end/mate-pair libraries, long reads, and synteny to closely related species.☆24Updated 6 years ago
- Detection and genotyping of structural variants☆18Updated last month
- ☆30Updated 5 years ago
- Custom tools to 'facilitate' BioNano Genomics data analysis☆33Updated 6 years ago
- Scripts to estimate genome size and coverage from kmer distribution generated by jellyfish☆56Updated 2 years ago
- VACmap: a long-read aligner specifically designed for complex structural variation discovery☆35Updated this week
- ☆80Updated 3 months ago
- Create a pseudohaploid assembly from a partially resolved diploid assembly☆32Updated 5 years ago
- Code for phasing SVs with SNPs☆52Updated 5 years ago
- Segmental Duplication Assembler (SDA).☆44Updated 2 years ago
- SV genotyping with long reads☆39Updated last year
- Structural variant caller☆54Updated 3 years ago
- ☆76Updated 4 years ago
- Dynamic time warping of Oxford Nanopore squiggle data to characterize tandem repeats.☆32Updated 4 years ago
- Alignment-based Scrubbing pipeline☆20Updated last year
- Minor Variant Calling and Phasing Tools☆15Updated 3 years ago
- My experimental tools on top of htslib. NOT OFFICIAL!!!☆55Updated last year
- A simple tool to fix PacBio fasta/q that was not properly split into subreads☆15Updated 3 years ago