PacificBiosciences / FALCON_unzipLinks
Making diploid assembly becomes common practice for genomic study
☆30Updated 8 years ago
Alternatives and similar repositories for FALCON_unzip
Users that are interested in FALCON_unzip are comparing it to the libraries listed below
Sorting:
- Improved Phased Assembler☆28Updated 3 years ago
- Visualising discordant reads☆15Updated 10 years ago
- Genome assembly scaffolding using information from paired-end/mate-pair libraries, long reads, and synteny to closely related species.☆24Updated 7 years ago
- ☆21Updated 6 years ago
- Miscellaneous scripts for applications of PacBio systems☆27Updated 3 years ago
- Pipeline for scaffolding and breaking a genome assembly using 10x genomics linked-reads☆21Updated 3 years ago
- Exact Tandem Repeat Finder (not a TRF replacement)☆51Updated 6 years ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆36Updated 6 years ago
- Compute N50/NG50 and auN/auNG☆33Updated 2 years ago
- This is an unsupported fork of the PacBio blasr aligner. It contains my (very beta) optimizations and new functionality. It may disappea…☆22Updated 6 years ago
- Method to optimally select samples for validation and resequencing☆29Updated 4 years ago
- Converting and demultiplexing of PacBio BAM files into gzipped fasta and fastq files.☆39Updated 2 years ago
- calling SVs from Blasr contig level alignments☆54Updated 7 years ago
- SV genotyping with long reads☆40Updated 2 years ago
- ☆50Updated last year
- Workflows for correcting and scaffolding long-read (PacBio, nanopore) genome assemblies using optical mapping and/or Dovetail Hi-C data☆20Updated 5 years ago
- Pipeline for structural variant image curation and analysis.☆49Updated 4 years ago
- Identification of segmental duplications in the genome☆27Updated 3 years ago
- Structural variant caller☆55Updated 4 years ago
- Alignment-based Scrubbing pipeline☆21Updated last year
- CAMSA: a tool for Comparative Analysis and Merging of Scaffold Assemblies☆24Updated 5 years ago
- A tool for recovering synteny blocks from multiple alignment☆32Updated 4 years ago
- An algorithm for centromere assembly using long error-prone reads☆25Updated 4 years ago
- Custom tools to 'facilitate' BioNano Genomics data analysis☆34Updated 7 years ago
- An easy way to run BioNano genomic analysis☆28Updated 4 years ago
- In-depth characterization and annotation of differences between two sets of DNA sequences☆63Updated 5 years ago
- Adapter trimming and virtual library creation for Illumina Nextera Mate Pair libraries.☆53Updated 7 years ago
- genomic alignment similarity search tool☆18Updated 7 months ago
- Segmental Duplication Assembler (SDA).☆44Updated 2 years ago
- Dynamic time warping of Oxford Nanopore squiggle data to characterize tandem repeats.☆32Updated 5 years ago