refresh-bio / FaStoreLinks
FaStore - high-performance FASTQ files compressor
☆19Updated 3 years ago
Alternatives and similar repositories for FaStore
Users that are interested in FaStore are comparing it to the libraries listed below
Sorting:
- Scripts for implementing read until and other examples.☆31Updated 5 years ago
- Classify sequencing reads using MinHash.☆48Updated 5 years ago
- Benchmark MinION assembler pipelines and publish your results in a heartbeat!☆15Updated 5 years ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆35Updated 6 years ago
- Profile HMM-based hybrid error correction algorithm for long reads☆21Updated 7 years ago
- Find Unique genomic Regions☆32Updated last week
- Minor Variant Calling and Phasing Tools☆15Updated 4 years ago
- Toolkit for extracting SVs from long sequences and benchmarking variant callers☆13Updated 9 years ago
- my PhD thesis☆36Updated 6 years ago
- de Bruijn Graph-based read aligner☆35Updated 7 years ago
- A comprehensive toolkit for running Oxford Nanopore's MinION☆12Updated 7 years ago
- URMAP ultra-fast read mapper☆38Updated 5 years ago
- A tool to reduce the size of Oxford Nanopore Technologies' datasets without losing information☆30Updated 2 years ago
- Preprocessing paired-end reads produced with experiment-specific protocols☆32Updated 7 years ago
- reference free variant assembly☆34Updated 2 years ago
- SAMsift: advanced filtering and tagging of SAM/BAM alignments using Python expressions.☆23Updated 4 months ago
- Accurate, Lightweight Clustering of de novo Transcriptomes using Fragment Equivalence Classes☆31Updated last year
- Whole Exome/Whole Genome Sequencing alignment pipeline☆29Updated last year
- Flexible circular visualization of genome-associated data with BioPerl and SVG.☆46Updated 6 years ago
- A graph aligner☆30Updated last year
- Exact Tandem Repeat Finder (not a TRF replacement)☆51Updated 6 years ago
- Integrated toolkit for analysis and evaluation of annotated genomes☆25Updated 6 months ago
- Python bindings for Bifrost's compacted colored de Bruijn Graph with a NetworkX-compatible API☆27Updated 2 years ago
- Animated GIF of flow cell performance from sequencing summary file.☆13Updated 7 years ago
- Analysis tool for Nanopore sequencing data☆34Updated 6 years ago
- program for haplotype phasing from sequence reads and related tools☆25Updated 7 years ago
- Identifying repeats in high-throughput sequencing data☆16Updated last year
- Population-wide Deletion Calling☆35Updated 9 months ago
- Accurate, resource-frugal and deterministic DNA sequence classifier.☆36Updated last month
- ELECTOR: EvaLuator of Error Correction Tools for lOng Reads☆15Updated 4 years ago