sejmodha / MiscScriptsLinks
☆12Updated 7 months ago
Alternatives and similar repositories for MiscScripts
Users that are interested in MiscScripts are comparing it to the libraries listed below
Sorting:
- In-depth characterization and annotation of differences between two sets of DNA sequences☆63Updated 5 years ago
- Improve the quality of a denovo assembly by scaffolding and gap filling☆56Updated 4 years ago
- ☆29Updated 4 years ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆36Updated 5 years ago
- kASA - k-Mer Analysis of Sequences based on Amino acid-like encoding☆23Updated 2 years ago
- MegaPath-Nano: Accurate Compositional Analysis and Drug-level Antimicrobial Resistance Detection Software for Oxford Nanopore Long-read M…☆14Updated 3 years ago
- Annotated Genome Optimization Using Transcriptome Information☆20Updated 5 years ago
- Find Unique genomic Regions☆30Updated last week
- Improved Phased Assembler☆28Updated 3 years ago
- mBin: a methylation-based binning framework for metagenomic SMRT sequencing reads☆25Updated 2 years ago
- WGS (Wheat) Robust Assembly Pipeline☆22Updated 4 years ago
- ☆26Updated 7 years ago
- compare sequences to a shared root reference sequence.☆24Updated 4 years ago
- Mash MinHash search your nucleotide sequences against a NCBI RefSeq genomes database☆42Updated 4 years ago
- Remove lambda phage reads from a fastq file☆29Updated 2 years ago
- genomic alignment similarity search tool☆18Updated 5 months ago
- Phylogeny Enhanded Prediction of PAN-genome☆42Updated 5 years ago
- Simple script to generate whole-genome coverage plots☆19Updated 10 years ago
- Generate unique KMERs for every contig in a FASTA file☆48Updated 3 years ago
- Genome assembly scaffolding using information from paired-end/mate-pair libraries, long reads, and synteny to closely related species.☆24Updated 6 years ago
- More realistic simulator for genomic DNA sequences from Illumina machines that achieves a similar k-mer spectrum as the original☆51Updated 3 years ago
- catalog for long-read sequencing tools☆32Updated 2 years ago
- A snakemake pipeline to assembly, polishing, correction and quality check from Oxford nanopore reads.☆36Updated 6 months ago
- hifiasm_meta - de novo metagenome assembler, based on hifiasm, a haplotype-resolved de novo assembler for PacBio Hifi reads.☆69Updated this week
- ☆26Updated 6 years ago
- Quality control plotting for long reads☆10Updated last year
- Interactive, web tool for exploring pan-genome of bacterial strains☆48Updated 2 years ago
- ☆30Updated 2 years ago
- Haplotype-aware genome assembly toolkit☆30Updated 5 years ago
- Converting and demultiplexing of PacBio BAM files into gzipped fasta and fastq files.☆38Updated 2 years ago