rcastelo / GSVALinks
Gene set variation analysis
☆221Updated 2 months ago
Alternatives and similar repositories for GSVA
Users that are interested in GSVA are comparing it to the libraries listed below
Sorting:
- Multi-sample multi-group scRNA-seq analysis tools☆194Updated 2 months ago
- Clone of the Bioconductor repository for the SingleR package.☆191Updated this week
- Easy single cell analysis platform for enrichment☆184Updated last month
- Color blindness friendly visualization of single-cell and bulk RNA-sequencing data☆197Updated 9 months ago
- Interactively analyze single cell genomic data☆182Updated last week
- Generate high quality, publication ready visualizations for single cell transcriptomics data.☆199Updated last month
- Fast Wilcoxon and auROC☆186Updated 8 months ago
- R package for modeling single cell UMI expression data using regularized negative binomial regression☆225Updated 2 months ago
- Methods for detecting doublets in single-cell sequencing data☆201Updated 3 months ago
- Shiny Interactive Web Apps for Single-Cell Data☆191Updated 2 months ago
- RNA velocity estimation in R☆189Updated last year
- R package with collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆264Updated this week
- Tools and methods for analysis of single cell assay data in R☆243Updated last year
- Some tools for plotting single-cell data☆172Updated last month
- Interpretation of cell states using reference single-cell maps☆281Updated last month
- LIANA: a LIgand-receptor ANalysis frAmework☆211Updated 11 months ago
- AUCell: score single cells with gene regulatory networks☆158Updated last year
- Cell types enrichment analysis☆198Updated last year
- Interfaces for HDF5-based Single Cell File Formats☆165Updated last year
- scplotter is an R package that is built upon plotthis. It provides a set of functions to visualize single-cell sequencing data in an easy…☆168Updated last week
- ☆172Updated 2 months ago
- Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequencing Data☆229Updated 2 years ago
- R package to infer biological activities from omics data using a collection of methods.☆260Updated 4 months ago
- Inferring, interpreting and visualising trajectories using a streamlined set of packages 🦕☆182Updated 4 years ago
- Dataset distribution for Seurat☆142Updated 4 months ago
- chromatin Variability Across Regions (of the genome!)☆178Updated last year
- Conversion between scRNA-seq objects☆178Updated 3 weeks ago
- TRAjectory-based Differential Expression analysis for SEQuencing data☆270Updated 3 weeks ago
- R package to quantify and remove cell free mRNAs from droplet based scRNA-seq data☆284Updated 2 years ago
- Functions for identifying and characterizing continuous developmental trajectories in single-cell data.☆298Updated last year