rcastelo / GSVALinks
Gene set variation analysis
☆231Updated last month
Alternatives and similar repositories for GSVA
Users that are interested in GSVA are comparing it to the libraries listed below
Sorting:
- Multi-sample multi-group scRNA-seq analysis tools☆217Updated last month
- Clone of the Bioconductor repository for the SingleR package.☆199Updated last month
- Shiny Interactive Web Apps for Single-Cell Data☆203Updated 9 months ago
- Easy single cell analysis platform for enrichment☆211Updated last month
- Fast Wilcoxon and auROC☆204Updated last year
- Color blindness friendly visualization of single-cell and bulk RNA-sequencing data☆212Updated 2 months ago
- Generate high quality, publication ready visualizations for single cell transcriptomics data.☆216Updated last month
- Interactively analyze single cell genomic data☆184Updated 3 weeks ago
- ☆202Updated 2 months ago
- R package for modeling single cell UMI expression data using regularized negative binomial regression☆248Updated last month
- Some tools for plotting single-cell data☆177Updated 8 months ago
- Interfaces for HDF5-based Single Cell File Formats☆170Updated 2 years ago
- R package with collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆288Updated last week
- Cell types enrichment analysis☆207Updated last year
- R package to infer biological activities from omics data using a collection of methods.☆284Updated last month
- RNA velocity estimation in R☆194Updated 2 years ago
- Scaling Single Cell Analysis to Millions of Cells☆257Updated 3 weeks ago
- Dataset distribution for Seurat☆151Updated 11 months ago
- LIANA: a LIgand-receptor ANalysis frAmework☆230Updated last year
- A Shiny web app for mapping datasets using Seurat v4☆144Updated last year
- Methods for detecting doublets in single-cell sequencing data☆230Updated last month
- ☆181Updated 9 months ago
- Interpretation of cell states using reference single-cell maps☆309Updated last month
- Tools and methods for analysis of single cell assay data in R☆260Updated 3 months ago
- TRAjectory-based Differential Expression analysis for SEQuencing data☆287Updated 7 months ago
- This repository contains R code, with which you can create 3D UMAP and tSNE plots of Seurat analyzed scRNAseq data☆122Updated 2 years ago
- R package for analyzing and interactively exploring large-scale single-cell RNA-seq datasets☆246Updated 5 months ago
- Gene set scoring for single-cell data☆180Updated 3 months ago
- R package to quantify and remove cell free mRNAs from droplet based scRNA-seq data☆311Updated 3 years ago
- Functions for identifying and characterizing continuous developmental trajectories in single-cell data.☆324Updated last year