saezlab / dorotheaLinks
R package to access DoRothEA's regulons
☆149Updated last year
Alternatives and similar repositories for dorothea
Users that are interested in dorothea are comparing it to the libraries listed below
Sorting:
- Clonotype Neighbor Graph Analysis☆90Updated 2 weeks ago
- SingleCellNet: classify single cells across species and platforms☆138Updated 2 years ago
- R package for Pathway RespOnsive GENe activity inference☆107Updated 2 years ago
- Collection of Tumor-Infiltrating Lymphocyte Single-Cell Experiments with TCR☆91Updated this week
- Single-Cell Clustering Assessment Framework☆105Updated last year
- Tools for single-cell data processing☆126Updated last year
- kallisto | bustools workflow for pre-processing single-cell RNA-seq data☆118Updated 3 years ago
- Efficient and precise single-cell reference atlas mapping with Symphony☆106Updated 2 years ago
- cisTopic: Probabilistic modelling of cis-regulatory topics from single cell epigenomics data☆141Updated last year
- dandelion - A single cell BCR/TCR V(D)J-seq analysis package for 10X Chromium 5' data☆118Updated last week
- R implementation of GLIPH (Grouping of Lymphocyte Interactions by Paratope Hotspots), an algorithm developed by Glanville et al to identi…☆22Updated 2 years ago
- A Shiny web app for mapping datasets using Seurat v4☆132Updated 9 months ago
- SCSA: cell type annotation for single-cell RNA-seq data☆91Updated 2 years ago
- Cluster single cells and analyze cell clade relationships with colorful visualizations.☆112Updated 9 months ago
- A tool that allows to get UMI counts from a single cell protein assay